RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 CCDC15Q0P6D6 951 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 CNTN1Q12860 1018 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 ACAP1Q15027 740 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 POM121L1PQ3SYA9 428 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 IL27RAQ6UWB1 636 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 ARFGAP1Q8N6T3 406 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 TM9SF3Q9HD45 589 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 DNAAF2Q9NVR5 837 aaKnown RBP28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 GPATCH2LQ9NWQ4 482 aa28.18■■■□□ 2.1
ATPAF1-201ENST00000329231 CACNA1EQ15878 2313 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3DA0A087WVF3 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3IA0A087WXS9 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 A0A087X0T9 212 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3EA0A087X179 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3KA0A087X1G2 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 A0A1W2PPC4 97 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3FA6NER0 549 aaPredicted RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 ZSCAN5CA6NGD5 496 aaPredicted RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3LB9A6J9 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 PLK4O00444 970 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 ZNF821O75541 412 aaPredicted RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 CTSLP07711 333 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3HP0C7X1 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 FAM228BP0C875 321 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 CSRP1P21291 193 aaKnown RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 MIPP30301 263 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 CSNK1EP49674 416 aaKnown RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 DNA2P51530 1060 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 YBEYP58557 167 aaPredicted RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3GQ6DHY5 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3CQ6IPX1 549 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 ALKBH5Q6P6C2 394 aaKnown RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 DPY19L3Q6ZPD9 716 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 ZNF354CQ86Y25 554 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 TBC1D3Q8IZP1 549 aaPredicted RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 OR2I1PQ8NGU4 316 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 ISG20Q96AZ6 181 aaKnown RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 DHX35Q9H5Z1 703 aaKnown RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 DYRK4Q9NR20 520 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 ARHGAP20Q9P2F6 1191 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 IL36AQ9UHA7 158 aa28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 FCF1Q9Y324 198 aaKnown RBP28.17■■■□□ 2.1
ATPAF1-201ENST00000329231 KPNA3O00505 521 aaPredicted RBP28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 PLRG1O43660 514 aaKnown RBP28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 KDELR3O43731 214 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 CD160O95971 181 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 GRIA4P48058 902 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 NOVA1P51513 510 aaKnown RBP28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 CARD16Q5EG05 197 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 AGBL4Q5VU57 503 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 PSTKQ8IV42 348 aaKnown RBP28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 CHST14Q8NCH0 376 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 ORAI3Q9BRQ5 295 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 SNRNP25Q9BV90 132 aaKnown RBP28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 THAP2Q9H0W7 228 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 NOL6Q9H6R4 1146 aaKnown RBP28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 SLCO1B1Q9Y6L6 691 aa28.16■■■□□ 2.1
ATPAF1-201ENST00000329231 UPK3BL1B0FP48 263 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 C10orf142B7Z368 130 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 UPK3BL2E5RIL1 263 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 EEF2KO00418 725 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 LRCH4O75427 683 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 TPM1P09493 284 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 PCK1P35558 622 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 RACK1P63244 317 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 SLC14A1Q13336 389 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 PARP15Q460N3 678 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 ARSIQ5FYB1 569 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 CCDC122Q5T0U0 273 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 PSAPL1Q6NUJ1 521 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 PLPP6Q8IY26 295 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 UMODL1-AS1Q8N2C9 162 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 OR8K1Q8NGG5 319 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 GRIN3AQ8TCU5 1115 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 PPP1R16AQ96I34 528 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 PEBP4Q96S96 227 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 HEPHQ9BQS7 1158 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 ACTL7AQ9Y615 435 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 ADAMTS9Q9P2N4 1935 aa28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 CNOT1A5YKK6 2376 aaKnown RBP28.15■■■□□ 2.1
ATPAF1-201ENST00000329231 A0A1B0GVT2 93 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 RASA4BC9J798 803 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 RASA4O43374 803 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 CER1O95813 267 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 CEACAM1P13688 526 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 ZNF135P52742 658 aaPredicted RBP28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 PIGHQ14442 188 aaPredicted RBP28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 CA9Q16790 459 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 ADAT2Q7Z6V5 191 aaKnown RBP28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 VSTM4Q8IW00 320 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 SLC32A1Q9H598 525 aa28.14■■■□□ 2.1
ATPAF1-201ENST00000329231 SPTBN2O15020 2390 aa28.14■■■□□ 2.09
ATPAF1-201ENST00000329231 CHD5Q8TDI0 1954 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 BUB1O43683 1085 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 LEFTY1O75610 366 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 GJB3O75712 270 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 CYP1A2P05177 515 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 ADRB1P08588 477 aa28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 EIF4A3P38919 411 aaKnown RBP28.13■■■□□ 2.09
ATPAF1-201ENST00000329231 CCNHP51946 323 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms