RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Gbp4Q61107 620 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Eif2b4Q61749 524 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Gm5414Q6IFZ8 552 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Far2Q7TNT2 515 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Slc18a2Q8BRU6 517 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Slc39a13Q8BZH0 361 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Ldlrap1Q8C142 308 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Psapl1Q8C1C1 522 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Snx30Q8CE50 437 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Gbp5Q8CFB4 590 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Vps37bQ8R0J7 285 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Pcdhb13Q91Y06 796 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Gpr37l1Q99JG2 481 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Ecrg4Q99LS0 148 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Ndufab1Q9CR21 156 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Marc1Q9CW42 340 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Atp6v1e2Q9D593 226 aa15.9■□□□□ 0.14
Ubp1-206ENSMUST00000216558 Baz2aQ91YE5 1889 aaKnown RBP15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Olfr1049A2ARZ0 308 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Itpripl1A2ASA8 547 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Lrriq4A6H6A4 596 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Gm20431E9PY39 371 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Il13ra1O09030 424 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 AgxtO35423 414 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ap1g2O88512 791 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Pias1O88907 651 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Coro1aO89053 461 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 E2f2P56931 443 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ncf4P97369 339 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Lingo3Q6GQU6 589 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Arhgef18Q6P9R4 1021 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Deup1Q7M6Y5 601 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Fstl5Q8BFR2 847 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ago1Q8CJG1 857 aaKnown RBP15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Pnpt1Q8K1R3 783 aaKnown RBP15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Msi2Q920Q6 346 aaKnown RBP15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ndufb5Q9CQH3 189 aa15.89■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Cep85lA0A1W2P884 806 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ism2D3Z6A3 493 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Lilra5D3Z7A9 295 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Sema3aO08665 772 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 C1qbpO35658 278 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Sp1O89090 784 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Krt10P02535 570 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Myl4P09541 193 aaKnown RBP15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Crabp2P22935 138 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Tlx1P43345 332 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Shox2P70390 331 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Cyp2c65Q148B1 490 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 IqcmQ149I8 489 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 March9Q3TZ87 348 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Mif4gdQ3UBZ5 222 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Foxred2Q3USW5 665 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 SnrpaQ62189 287 aaKnown RBP15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 CcncQ62447 283 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Klhl38Q8BSF5 581 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Tbc1d17Q8BYH7 645 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Pih1h3bQ8C6P5 218 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Cacnb2Q8CC27 655 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Lrrc14Q8VC16 493 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Imp4Q8VHZ7 291 aaKnown RBP15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Stk33Q924X7 491 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 LiasQ99M04 373 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ly6kQ9CWP4 154 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Q9D937 123 aaKnown RBP15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 TsaccQ9DA44 124 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 PllpQ9DCU2 182 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Tlr9Q9EQU3 1032 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Oaz3Q9R109 243 aa15.88■□□□□ 0.13
Ubp1-206ENSMUST00000216558 4930444G20RikD3Z741 495 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Exoc7O35250 697 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 LifP09056 203 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Gas2P11862 314 aaKnown RBP15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Tcf3P15806 651 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Tap1P21958 724 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ripply1Q2WG77 201 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Foxr1Q3UTB7 268 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Mfsd3Q5U419 412 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Gga2Q6P5E6 603 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 ItpkcQ7TS72 678 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Zswim5Q80TC6 1188 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Ccdc68Q8BVC4 333 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Tbc1d14Q8CGA2 694 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 CherpQ8CGZ0 936 aaKnown RBP15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Tcaf2Q921K8 919 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Mccc1Q99MR8 717 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Themis3Q9CU24 569 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Pard6bQ9JK83 371 aa15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Nup210Q9QY81 1886 aaKnown RBP15.87■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Sdc4O35988 198 aaKnown RBP15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Prkag1O54950 330 aa15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Srpk1O70551 648 aaKnown RBP15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 PdgfrbP05622 1098 aa15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 JundP15066 341 aa15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Gna12P27600 379 aa15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 AdprhP54923 362 aa15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Rps24P62849 133 aaKnown RBP15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Otol1Q4ZJM7 482 aa15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Gpr19Q61121 415 aa15.86■□□□□ 0.13
Ubp1-206ENSMUST00000216558 Bdkrb1Q61125 334 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 62.6 ms