Protein–RNA interactions for Protein: Q8CE50

Snx30, Sorting nexin-30, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx30Q8CE50 Gm25239-201ENSMUST00000174915 86 ntBASIC37.73■■■■□ 3.63
Snx30Q8CE50 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Snx30Q8CE50 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Snx30Q8CE50 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Snx30Q8CE50 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Snx30Q8CE50 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.43■■■□□ 2.94
Snx30Q8CE50 Gm15042-201ENSMUST00000120212 883 ntBASIC33.38■■■□□ 2.93
Snx30Q8CE50 Gm15045-201ENSMUST00000117359 883 ntBASIC32.72■■■□□ 2.83
Snx30Q8CE50 Gm24109-201ENSMUST00000175489 103 ntBASIC32.51■■■□□ 2.79
Snx30Q8CE50 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Snx30Q8CE50 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Snx30Q8CE50 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Snx30Q8CE50 Psd-208ENSMUST00000224556 2034 ntBASIC32.05■■■□□ 2.72
Snx30Q8CE50 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
Snx30Q8CE50 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.8■■■□□ 2.68
Snx30Q8CE50 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Snx30Q8CE50 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Snx30Q8CE50 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Snx30Q8CE50 Gm23366-201ENSMUST00000175022 89 ntBASIC31.57■■■□□ 2.64
Snx30Q8CE50 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Snx30Q8CE50 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Snx30Q8CE50 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Snx30Q8CE50 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Snx30Q8CE50 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Snx30Q8CE50 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Snx30Q8CE50 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Snx30Q8CE50 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Snx30Q8CE50 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.01■■■□□ 2.55
Snx30Q8CE50 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Snx30Q8CE50 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Snx30Q8CE50 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Snx30Q8CE50 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Snx30Q8CE50 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Snx30Q8CE50 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.64■■■□□ 2.5
Snx30Q8CE50 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.61■■■□□ 2.49
Snx30Q8CE50 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Snx30Q8CE50 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Snx30Q8CE50 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Snx30Q8CE50 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Snx30Q8CE50 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.07■■■□□ 2.4
Snx30Q8CE50 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.06■■■□□ 2.4
Snx30Q8CE50 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Snx30Q8CE50 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Snx30Q8CE50 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Snx30Q8CE50 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Snx30Q8CE50 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.78■■■□□ 2.36
Snx30Q8CE50 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.75■■■□□ 2.35
Snx30Q8CE50 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Snx30Q8CE50 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
Snx30Q8CE50 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Snx30Q8CE50 Gm25238-201ENSMUST00000174914 89 ntBASIC29.64■■■□□ 2.34
Snx30Q8CE50 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Snx30Q8CE50 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.62■■■□□ 2.33
Snx30Q8CE50 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Snx30Q8CE50 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.58■■■□□ 2.33
Snx30Q8CE50 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Snx30Q8CE50 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Snx30Q8CE50 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Snx30Q8CE50 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Snx30Q8CE50 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Snx30Q8CE50 Gm27325-201ENSMUST00000175467 74 ntBASIC29.33■■■□□ 2.29
Snx30Q8CE50 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Snx30Q8CE50 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Snx30Q8CE50 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.21■■■□□ 2.27
Snx30Q8CE50 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.2■■■□□ 2.26
Snx30Q8CE50 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.19■■■□□ 2.26
Snx30Q8CE50 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Snx30Q8CE50 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.12■■■□□ 2.25
Snx30Q8CE50 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.11■■■□□ 2.25
Snx30Q8CE50 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Snx30Q8CE50 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.1■■■□□ 2.25
Snx30Q8CE50 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Snx30Q8CE50 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Snx30Q8CE50 Gm42596-201ENSMUST00000196305 1958 ntBASIC29■■■□□ 2.23
Snx30Q8CE50 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Snx30Q8CE50 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Snx30Q8CE50 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Snx30Q8CE50 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Snx30Q8CE50 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Snx30Q8CE50 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.81■■■□□ 2.2
Snx30Q8CE50 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.81■■■□□ 2.2
Snx30Q8CE50 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Snx30Q8CE50 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Snx30Q8CE50 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
Snx30Q8CE50 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Snx30Q8CE50 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.66■■■□□ 2.18
Snx30Q8CE50 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Snx30Q8CE50 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.64■■■□□ 2.18
Snx30Q8CE50 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Snx30Q8CE50 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
Snx30Q8CE50 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Snx30Q8CE50 Rab21-202ENSMUST00000218831 843 ntBASIC28.53■■■□□ 2.16
Snx30Q8CE50 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Snx30Q8CE50 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Snx30Q8CE50 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Snx30Q8CE50 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Snx30Q8CE50 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Snx30Q8CE50 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.37■■■□□ 2.13
Snx30Q8CE50 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Snx30Q8CE50 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms