Protein–RNA interactions for Protein: P09541

Myl4, Myosin light chain 4, mousemouse

Known RBP Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Myl4P09541 Gm25239-201ENSMUST00000174915 86 ntBASIC39.89■■■■□ 3.98
Myl4P09541 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
Myl4P09541 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Myl4P09541 Gm15042-201ENSMUST00000120212 883 ntBASIC34.82■■■■□ 3.16
Myl4P09541 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
Myl4P09541 Gm24109-201ENSMUST00000175489 103 ntBASIC34.57■■■■□ 3.12
Myl4P09541 Gm15045-201ENSMUST00000117359 883 ntBASIC34.02■■■■□ 3.04
Myl4P09541 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Myl4P09541 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.65■■■□□ 2.98
Myl4P09541 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.65■■■□□ 2.98
Myl4P09541 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
Myl4P09541 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.54■■■□□ 2.96
Myl4P09541 Gm23366-201ENSMUST00000175022 89 ntBASIC33.32■■■□□ 2.92
Myl4P09541 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Myl4P09541 Psd-208ENSMUST00000224556 2034 ntBASIC32.65■■■□□ 2.82
Myl4P09541 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Myl4P09541 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.29■■■□□ 2.76
Myl4P09541 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Myl4P09541 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
Myl4P09541 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.11■■■□□ 2.73
Myl4P09541 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Myl4P09541 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.06■■■□□ 2.72
Myl4P09541 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Myl4P09541 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Myl4P09541 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.94■■■□□ 2.7
Myl4P09541 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Myl4P09541 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
Myl4P09541 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Myl4P09541 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Myl4P09541 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Myl4P09541 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Myl4P09541 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Myl4P09541 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Myl4P09541 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Myl4P09541 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.49■■■□□ 2.63
Myl4P09541 Gm25238-201ENSMUST00000174914 89 ntBASIC31.49■■■□□ 2.63
Myl4P09541 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Myl4P09541 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.41■■■□□ 2.62
Myl4P09541 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Myl4P09541 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Myl4P09541 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Myl4P09541 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Myl4P09541 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
Myl4P09541 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.84■■■□□ 2.53
Myl4P09541 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
Myl4P09541 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Myl4P09541 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.7■■■□□ 2.51
Myl4P09541 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Myl4P09541 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
Myl4P09541 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
Myl4P09541 Gm27325-201ENSMUST00000175467 74 ntBASIC30.49■■■□□ 2.47
Myl4P09541 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.47■■■□□ 2.47
Myl4P09541 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Myl4P09541 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
Myl4P09541 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Myl4P09541 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.35■■■□□ 2.45
Myl4P09541 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.26■■■□□ 2.43
Myl4P09541 Gm25262-201ENSMUST00000174934 133 ntBASIC30.2■■■□□ 2.43
Myl4P09541 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Myl4P09541 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Myl4P09541 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Myl4P09541 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.08■■■□□ 2.41
Myl4P09541 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.07■■■□□ 2.4
Myl4P09541 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Myl4P09541 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Myl4P09541 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Myl4P09541 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Myl4P09541 Rab21-202ENSMUST00000218831 843 ntBASIC29.97■■■□□ 2.39
Myl4P09541 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.9■■■□□ 2.38
Myl4P09541 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Myl4P09541 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Myl4P09541 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.73■■■□□ 2.35
Myl4P09541 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Myl4P09541 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.66■■■□□ 2.34
Myl4P09541 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.64■■■□□ 2.34
Myl4P09541 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.6■■■□□ 2.33
Myl4P09541 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.6■■■□□ 2.33
Myl4P09541 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
Myl4P09541 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Myl4P09541 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.57■■■□□ 2.32
Myl4P09541 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.57■■■□□ 2.32
Myl4P09541 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Myl4P09541 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Myl4P09541 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
Myl4P09541 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Myl4P09541 Gm26115-201ENSMUST00000175605 87 ntBASIC29.46■■■□□ 2.31
Myl4P09541 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
Myl4P09541 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Myl4P09541 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Myl4P09541 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Myl4P09541 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Myl4P09541 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Myl4P09541 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Myl4P09541 Gm8109-201ENSMUST00000194076 746 ntBASIC29.31■■■□□ 2.28
Myl4P09541 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
Myl4P09541 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Myl4P09541 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Myl4P09541 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.22■■■□□ 2.27
Myl4P09541 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.21■■■□□ 2.27
Myl4P09541 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.16■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms