RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 CBX8Q9HC52 389 aa21.95■■□□□ 1.1
PPP4R1-228ENST00000584074 ATP13A1Q9HD20 1204 aa21.95■■□□□ 1.1
PPP4R1-228ENST00000584074 NDFIP2Q9NV92 336 aa21.95■■□□□ 1.1
PPP4R1-228ENST00000584074 ANKRD6Q9Y2G4 727 aa21.95■■□□□ 1.1
PPP4R1-228ENST00000584074 FNDC3AQ9Y2H6 1198 aaKnown RBP21.95■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3DA0A087WVF3 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3IA0A087WXS9 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3EA0A087X179 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3KA0A087X1G2 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3FA6NER0 549 aaPredicted RBP21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TMCO5BA8MYB1 307 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3LB9A6J9 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 C1QTNF3-AMACRE9PGA6 284 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 CCP110O43303 1012 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 LRIG2O94898 1065 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 CER1O95813 267 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 SERPINC1P01008 464 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3HP0C7X1 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 CCR5P51681 352 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 ZNF143P52747 638 aaPredicted RBP21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 SIM1P81133 766 aaPredicted RBP21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 SHC2P98077 582 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 FOXC1Q12948 553 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 NR1I3Q14994 352 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 ASIC2Q16515 512 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 E4F1Q66K89 784 aaPredicted RBP21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3GQ6DHY5 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3CQ6IPX1 549 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 NLRP14Q86W24 1093 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D3Q8IZP1 549 aaPredicted RBP21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 NTAN1Q96AB6 310 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 FAM131CQ96AQ9 280 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 TNKS2Q9H2K2 1166 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 NEU3Q9UQ49 428 aa21.94■■□□□ 1.1
PPP4R1-228ENST00000584074 ANKRD62A6NC57 917 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 KCNK3O14649 394 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 CTSLP07711 333 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 RHOQP17081 205 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 CHRNA3P32297 505 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 ACVRL1P37023 503 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 CLCN6P51797 869 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 PPP2CBP62714 309 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 RACK1P63244 317 aaKnown RBP21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 PPP2CAP67775 309 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 CACNA1EQ15878 2313 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 SCYL2Q6P3W7 929 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 ADAT2Q7Z6V5 191 aaKnown RBP21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 SLFN11Q7Z7L1 901 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 LUZP1Q86V48 1076 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 DNAAF5Q86Y56 855 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 NAXDQ8IW45 347 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 PYROXD2Q8N2H3 581 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 CHST14Q8NCH0 376 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 HAUS4Q9H6D7 363 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 TM7SF3Q9NS93 570 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 NYNRINQ9P2P1 1898 aaKnown RBP21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 DNAI1Q9UI46 699 aa21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 FARP1Q9Y4F1 1045 aaPredicted RBP21.93■■□□□ 1.1
PPP4R1-228ENST00000584074 RNF103O00237 685 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 WNT9AO14904 365 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 ZNF821O75541 412 aaPredicted RBP21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 TOP3BO95985 862 aaKnown RBP21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 ZNF883P0CG24 379 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 ARF5P84085 180 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 OGDHQ02218 1023 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 SCAPQ12770 1279 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 AGBL4Q5VU57 503 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 SFMBT2Q5VUG0 894 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 RETSATQ6NUM9 610 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 C22orf39Q6P5X5 142 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 DCUN1D2Q6PH85 259 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 ZNF571Q7Z3V5 609 aaPredicted RBP21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 TBC1D31Q96DN5 1066 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 CCDC114Q96M63 670 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 CNPY3Q9BT09 278 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 ACE2Q9BYF1 805 aaPredicted RBP21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 TTYH3Q9C0H2 523 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 TMEM248Q9NWD8 314 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 AIPL1Q9NZN9 384 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 WASF3Q9UPY6 502 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 ACTL7AQ9Y615 435 aa21.92■■□□□ 1.1
PPP4R1-228ENST00000584074 KPNA3O00505 521 aaPredicted RBP21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 SLC7A4O43246 635 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 ATMINO43313 823 aaPredicted RBP21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 PLRG1O43660 514 aaKnown RBP21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 SPINK2P20155 84 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 MAPKAPK2P49137 400 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 SERPINH1P50454 418 aaKnown RBP21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 SLC20A2Q08357 652 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 VCPIP1Q96JH7 1222 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 KDM4CQ9H3R0 1056 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 RETREG1Q9H6L5 497 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 FRYQ5TBA9 3013 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 CHD8Q9HCK8 2581 aa21.91■■□□□ 1.1
PPP4R1-228ENST00000584074 VILLO15195 856 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 LATO43561 262 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 WNT1P04628 370 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 MAT2AP31153 395 aaKnown RBP21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 L1CAMP32004 1257 aa21.9■■□□□ 1.1
PPP4R1-228ENST00000584074 PRKCIP41743 596 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms