RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 LRRC40Q9H9A6 602 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SNCAIPQ9Y6H5 919 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PIK3R4Q99570 1358 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TNNI3P19429 210 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 RPS7P62081 194 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP4F2P78329 520 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP4F3Q08477 520 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PRKD1Q15139 912 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PTRHD1Q6GMV3 140 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 DNAJB7Q7Z6W7 309 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 LSM14AQ8ND56 463 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CDK5RAP1Q96SZ6 601 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 VAT1Q99536 393 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MAP3K20Q9NYL2 800 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 EGFL7Q9UHF1 273 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CCNE2O96020 404 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 AP2S1P53680 142 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ASPRV1Q53RT3 343 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 OR52E8Q6IFG1 317 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ENDOVQ8N8Q3 282 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 FAM193BQ96PV7 902 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 DOPEY2Q9Y3R5 2298 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 C5orf60A6NFR6 353 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 BANF1O75531 89 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 LRIG2O94898 1065 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PRKAA2P54646 552 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SLC15A4Q8N697 577 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SPERTQ8NA61 448 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF347Q96SE7 839 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SMAD5Q99717 465 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ADI1Q9BV57 179 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TARS2Q9BW92 718 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 EXD2Q9NVH0 621 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 METTL21EPA6NDL7 271 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 RNASEH1O60930 286 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TCF7P36402 384 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 DCAF6Q58WW2 860 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TRABD2AQ86V40 505 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 HIPK1Q86Z02 1210 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MCUBQ9NWR8 336 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PPM1HQ9ULR3 514 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NUPL2O15504 423 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 IL32P24001 234 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 GNA15P30679 374 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ABCG1P45844 678 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 C11orf91Q3C1V1 193 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TNKS2Q9H2K2 1166 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 FEM1BQ9UK73 627 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 GJA3Q9Y6H8 435 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 YBX3P16989 372 aaKnown RBP eCLIP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PPP2R2BQ00005 443 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PAOXQ6QHF9 649 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TOP1MTQ969P6 601 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 HPDLQ96IR7 371 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 HNRNPABQ99729 332 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 MRPL45Q9BRJ2 306 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TIGARQ9NQ88 270 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 POMPQ9Y244 141 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NSD3Q9BZ95 1437 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF804BA4D1E1 1349 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CD40LGP29965 261 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 YAP1P46937 504 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 GABRB2P47870 512 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NEK3P51956 506 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CASP12Q6UXS9 341 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CYP2C9P11712 490 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ITGB6P18564 788 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 C11orf96Q7Z7L8 435 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CBWD2Q8IUF1 395 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF606Q8WXB4 792 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ITGA11Q9UKX5 1188 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 AKT3Q9Y243 479 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ZNF879B4DU55 563 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 NUDT17P0C025 328 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 LIPEQ05469 1076 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 FAM102AQ5T9C2 384 aaPredicted RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SCARA5Q6ZMJ2 495 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 CD93Q9NPY3 652 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 POLE4Q9NR33 117 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PFDN2Q9UHV9 154 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 PPP2R3BQ9Y5P8 575 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 THOP1P52888 689 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 ACLYP53396 1101 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SMIM11AP58511 58 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TRIM28Q13263 835 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 USP43Q70EL4 1123 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 HSFY1Q96LI6 401 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 BTNL10A8MVZ5 291 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 USP30Q70CQ3 517 aa3.74□□□□□ -1.81
ATXN3-248ENST00000558190 SMG8Q8ND04 991 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TRNT1Q96Q11 434 aaKnown RBP3.74□□□□□ -1.81
ATXN3-248ENST00000558190 TNFRSF8P28908 595 aa3.73□□□□□ -1.81
ATXN3-248ENST00000558190 Q6ZNX1 250 aa3.73□□□□□ -1.81
ATXN3-248ENST00000558190 C12orf43Q96C57 262 aaKnown RBP3.73□□□□□ -1.81
ATXN3-248ENST00000558190 VCPIP1Q96JH7 1222 aa3.73□□□□□ -1.81
ATXN3-248ENST00000558190 PNMA5Q96PV4 448 aa3.73□□□□□ -1.81
ATXN3-248ENST00000558190 OR52E6Q96RD3 313 aa3.73□□□□□ -1.81
ATXN3-248ENST00000558190 KCNU1A8MYU2 1149 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms