RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 PBX1P40424 430 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ATXN3P54252 364 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ELAVL3Q14576 367 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 UAP1L1Q3KQV9 507 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 PPM1JQ5JR12 505 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 RWDD4Q6NW29 188 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 SCYL2Q6P3W7 929 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 TFAP2DQ7Z6R9 452 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 SLFN11Q7Z7L1 901 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 DSG4Q86SJ6 1040 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CCDC185Q8N715 623 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 OR8D1Q8WZ84 308 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 SYN2Q92777 582 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 NTAN1Q96AB6 310 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 IQCDQ96DY2 449 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 PSMB7Q99436 277 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 CNPY3Q9BT09 278 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 SPON2Q9BUD6 331 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 MAGEB5Q9BZ81 275 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 NEUROG2Q9H2A3 272 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 C6orf106Q9H6K1 298 aaPredicted RBP9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ZNF212Q9UDV6 495 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ADAMTS1Q9UHI8 967 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 EIF2B4Q9UI10 523 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 VPS51Q9UID3 782 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 HS3ST2Q9Y278 367 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 ADGRG1Q9Y653 693 aa9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 BZW2Q9Y6E2 419 aaKnown RBP9.97□□□□□ -0.81
TNFRSF1A-214ENST00000543048 A0A1W2PP55 124 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LRRC72A6NJI9 287 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM72CH0Y354 149 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DDX3XO00571 662 aaKnown RBP eCLIP9.96□□□□□ -0.823e-9■■□□□ 12.9
TNFRSF1A-214ENST00000543048 MCF2LO15068 1137 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 BCAT2O15382 392 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CCP110O43303 1012 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SNAP91O60641 907 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RNASEH2AO75792 299 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 IL1BP01584 269 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SRCP12931 536 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 VAV1P15498 845 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RHOQP17081 205 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FECHP22830 423 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 L1CAMP32004 1257 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MAPK8P45983 427 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PSMD8P48556 350 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GALCP54803 685 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 AIF1P55008 147 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZBED6P86452 979 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GNA12Q03113 381 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SCAPQ12770 1279 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MAMLD1Q13495 774 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 EFHC2Q5JST6 749 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM72AQ5TYM5 149 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM46CQ5VWP2 391 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PLEKHA7Q6IQ23 1121 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM72DQ6L9T8 149 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RETSATQ6NUM9 610 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM72BQ86X60 149 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DRC7Q8IY82 874 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 HDDC3Q8N4P3 179 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ATP11CQ8NB49 1132 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OR7D4Q8NG98 312 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 C1orf216Q8TAB5 229 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CPLX3Q8WVH0 158 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TBC1D31Q96DN5 1066 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MCEEQ96PE7 176 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GTPBP2Q9BX10 602 aaKnown RBP9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZDHHC5Q9C0B5 715 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 IFNKQ9P0W0 207 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 PPM1HQ9ULR3 514 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FZD4Q9ULV1 537 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CAPN11Q9UMQ6 739 aa9.96□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MED19A0JLT2 244 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TMEM191CA6NGB0 347 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FAM47DPA6NHR8 397 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 K7ERQ8 282 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CBX4O00257 560 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ALOX15BO15296 676 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 SMAD6O43541 496 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OPHN1O60890 802 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZMPSTE24O75844 475 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 LRIG2O94898 1065 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 FSBPO95073 299 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KCNK5O95279 499 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TPM3P06753 285 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 GLDCP23378 1020 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 CD27P26842 260 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ETFBP38117 255 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MAPKAPK2P49137 400 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 OGDHQ02218 1023 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 MANEALQ5VSG8 457 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 E4F1Q66K89 784 aaPredicted RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 KIAA0895LQ68EN5 471 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 TMC6Q7Z403 805 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 VPS36Q86VN1 386 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 NLRP14Q86W24 1093 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 ZCCHC9Q8N567 271 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 AADATQ8N5Z0 425 aa9.95□□□□□ -0.82
TNFRSF1A-214ENST00000543048 DCAF4L2Q8NA75 395 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms