RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 FBRSL1Q9HCM7 1045 aaKnown RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 PRDM11Q9NQV5 511 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 LRFN1Q9P244 771 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 FNIP2Q9P278 1114 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 ZMYND8Q9ULU4 1186 aaPredicted RBP0.9□□□□□ -2.27
COPB1-212ENST00000534771 PHTF1Q9UMS5 762 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 SLC12A4Q9UP95 1085 aa0.9□□□□□ -2.27
COPB1-212ENST00000534771 A0A087WZ62 844 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 PNMA6EA0A0J9YXQ4 647 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 TCRBV7S3A2A0A539 114 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 DYTNA2CJ06 578 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 C17orf102A2RUQ5 167 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 KDM4EB2RXH2 506 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 NPIPB11E5RHQ5 1161 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 NKX2-8O15522 239 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 RNMTO43148 476 aaKnown RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 MGEA5O60502 916 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 TMCC1O94876 653 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 VIPP01282 170 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 HLA-DQA2P01906 255 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 PRSS1P07477 247 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 SRGAP2BP0DMP2 458 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 UNGP13051 313 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 PRG2P13727 222 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 IDEP14735 1019 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 HOXB9P17482 250 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 RPL17P18621 184 aaKnown RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 MYF6P23409 242 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 TYK2P29597 1187 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 RFC1P35251 1148 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 KRT9P35527 623 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 LIFRP42702 1097 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 CYP2J2P51589 502 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 CLCN3P51790 818 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 LINC01547P58512 204 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 CYP4A11Q02928 519 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 TLE3Q04726 772 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 SREBF2Q12772 1141 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 GRIK2Q13002 908 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 DHX34Q14147 1143 aaKnown RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 CTTNQ14247 550 aaKnown RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 POLD3Q15054 466 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 TTF1Q15361 905 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 CALCRLQ16602 461 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 AAK1Q2M2I8 961 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 BRDTQ58F21 947 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 ARL13AQ5H913 290 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 TCTE1Q5JU00 501 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 RAP1GAP2Q684P5 730 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 SPINK14Q6IE38 97 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 MSANTD2Q6P1R3 559 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 ARHGAP11AQ6P4F7 1023 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 KIAA0408Q6ZU52 694 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 EPM2AIP1Q7L775 607 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 ANKS1BQ7Z6G8 1248 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 TMEM200AQ86VY9 491 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 CCDC28AQ8IWP9 274 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 TPH2Q8IWU9 490 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 ZDHHC23Q8IYP9 409 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 RBFAQ8N0V3 343 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 OR13A1Q8NGR1 328 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 FAM76AQ8TAV0 307 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 FAM110DQ8TAY7 271 aaPredicted RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 LRTOMTQ8WZ04 291 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 LGALS12Q96DT0 336 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 SNX27Q96L92 541 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 OR1F2PQ96R84 312 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 LITAFQ99732 161 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 DDX23Q9BUQ8 820 aaKnown RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 RHOBTB2Q9BYZ6 727 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 MAGEB5Q9BZ81 275 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 EBF2Q9HAK2 575 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 METTL14Q9HCE5 456 aaKnown RBP0.89□□□□□ -2.27
COPB1-212ENST00000534771 PTPRHQ9HD43 1115 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 RPS10P5Q9NQ39 176 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 HOMER2Q9NSB8 354 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 SMARCAL1Q9NZC9 954 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 SEL1LQ9UBV2 794 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 CDH22Q9UJ99 828 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 ZNF180Q9UJW8 692 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 CNTN6Q9UQ52 1028 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 ZNF711Q9Y462 761 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 RNF215Q9Y6U7 377 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 MST1RQ04912 1400 aa0.89□□□□□ -2.27
COPB1-212ENST00000534771 SBNO2Q9Y2G9 1366 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 A0A1W2PS18 150 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 E2F8A0AVK6 867 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 PMS2P5A8MQ11 134 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 F8W8V4 182 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GOLIM4O00461 696 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 RFPL1O75677 317 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GAGE7O76087 117 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 VNN2O95498 520 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 CH25HO95992 272 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 MMP3P08254 477 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 CYP3A4P08684 503 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GAGE12FP0CL80 117 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GAGE12GP0CL81 117 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 GAGE12IP0CL82 117 aa0.88□□□□□ -2.27
COPB1-212ENST00000534771 IGHV4-30-4P0DP06 118 aa0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms