RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SLC26A11Q86WA9 606 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 CATSPER3Q86XQ3 398 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 FAM9CQ8IZT9 166 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 GIMAP5Q96F15 307 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 ZNF560Q96MR9 790 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 TBCBQ99426 244 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 NARFLQ9H6Q4 476 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 SYTL2Q9HCH5 934 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 ADPRHL2Q9NX46 363 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 ATPIF1Q9UII2 106 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 MKL2Q9ULH7 1088 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 MTSS1O43312 755 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 IFNB1P01574 187 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 AKR1B1P15121 316 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 SPNP16150 400 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 YBX3P16989 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
SPIDR-217ENST00000522117 ELK3P41970 407 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 NUMBP49757 651 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 FCHO2Q0JRZ9 810 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 NFIL3Q16649 462 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 PXDC1Q5TGL8 231 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 KIAA1841Q6NSI8 718 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 PGAM4Q8N0Y7 254 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 ANKFN1Q8N957 763 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 MBOAT7Q96N66 472 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 ADI1Q9BV57 179 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 MKRN2Q9H000 416 aaKnown RBP12.24□□□□□ -0.45
SPIDR-217ENST00000522117 KLHL11Q9NVR0 708 aa12.24□□□□□ -0.45
SPIDR-217ENST00000522117 ZNFX1Q9P2E3 1918 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 PCM1Q15154 2024 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 A0A0G2JMP0 313 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 C9IYK1 514 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 KBTBD13C9JR72 458 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 PI4K2BG5E9Z4 385 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 TOR1BO14657 336 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 SHOXO15266 292 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 BCAS1O75363 584 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 PROSCO94903 275 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 CLIC3O95833 236 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 ARNTP27540 789 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 WEE1P30291 646 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 CRHR1P34998 444 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 SERPINB5P36952 375 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 YAP1P46937 504 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 TNNI2P48788 182 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 MLLT6P55198 1093 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 GPLD1P80108 840 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 TAGLNQ01995 201 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 VAC14Q08AM6 782 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 TRIM32Q13049 653 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 SLC36A3Q495N2 470 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 CYP20A1Q6UW02 462 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 RHOT1Q8IXI2 618 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 ADGRF2Q8IZF7 708 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 ZCCHC7Q8N3Z6 543 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 RCN3Q96D15 328 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 HDAC11Q96DB2 347 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 ACO2Q99798 780 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 TMEM246Q9BRR3 403 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 BOLA1Q9Y3E2 137 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 COL5A3P25940 1745 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 EVPLLA8MZ36 301 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 P4HBP07237 508 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 TCN1P20061 433 aaPredicted RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 RRM2P31350 389 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 GRIA1P42261 906 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 OR3A3P47888 321 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 HLCSP50747 726 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 RPL10AP62906 217 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 MERTKQ12866 999 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 PLA2G4FQ68DD2 849 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 KCTD20Q7Z5Y7 419 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 CADM2Q8N3J6 435 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 FAM109AQ8N4B1 249 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 FKBP10Q96AY3 582 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 FBXL20Q96IG2 436 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 TRIM39Q9HCM9 518 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 DMAC2Q9NW81 257 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 KCND2Q9NZV8 630 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 CNOT6Q9ULM6 557 aaKnown RBP12.23□□□□□ -0.45
SPIDR-217ENST00000522117 PCDHGB3Q9Y5G1 929 aa12.23□□□□□ -0.45
SPIDR-217ENST00000522117 CACNA1SQ13698 1873 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 MROH5Q6ZUA9 1318 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 PTPRFP10586 1907 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 A0A0X1KG70 313 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 SGK1O00141 431 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 CCNKO75909 580 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 KRT37O76014 449 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 MFN2O95140 757 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 MBL2P11226 248 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-217ENST00000522117 ENO3P13929 434 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-217ENST00000522117 SNX17Q15036 470 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 AASDHQ4L235 1098 aaPredicted RBP12.22□□□□□ -0.45
SPIDR-217ENST00000522117 XAF1Q6GPH4 301 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
SPIDR-217ENST00000522117 LACC1Q8IV20 430 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms