RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 COL5A1P20908 1838 aaPredicted RBP21.26■□□□□ 0.99
CPNE1-219ENST00000440240 TFE3P19532 575 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-219ENST00000440240 ERCC5P28715 1186 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-219ENST00000440240 DNAJC3Q13217 504 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 COL28A1Q2UY09 1125 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 ALFQ53S48 1182 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 C6orf118Q5T5N4 469 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 FAM102AQ5T9C2 384 aaPredicted RBP21.25■□□□□ 0.99
CPNE1-219ENST00000440240 SFMBT2Q5VUG0 894 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 ZNF683Q8IZ20 524 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 DCAF4L2Q8NA75 395 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 TSC1Q92574 1164 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 KLHDC7BQ96G42 594 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 PSMB7Q99436 277 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 ANLNQ9NQW6 1124 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 DYRK4Q9NR20 520 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 VPS51Q9UID3 782 aa21.25■□□□□ 0.99
CPNE1-219ENST00000440240 CBX4O00257 560 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 KPNA3O00505 521 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-219ENST00000440240 SNAP91O60641 907 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 PRNPP04156 253 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 HOXB3P14651 431 aaPredicted RBP21.24■□□□□ 0.99
CPNE1-219ENST00000440240 OR1E1P30953 314 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 ACADVLP49748 655 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 TAS2R38P59533 333 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 ILKQ13418 452 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 MIIPQ5JXC2 388 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 KLHDC7AQ5VTJ3 777 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 DPY19L2P1Q6NXN4 242 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 XYLT1Q86Y38 959 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 MSANTD4Q8NCY6 345 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 HNRNPLLQ8WVV9 542 aaKnown RBP21.24■□□□□ 0.99
CPNE1-219ENST00000440240 HAPLN3Q96S86 360 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 TBCBQ99426 244 aa21.24■□□□□ 0.99
CPNE1-219ENST00000440240 FASNP49327 2511 aaKnown RBP21.24■□□□□ 0.99
CPNE1-219ENST00000440240 ADAMTS20P59510 1910 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 IGLV3-10A0A075B6K4 115 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 I6L893 689 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-219ENST00000440240 PES1O00541 588 aaKnown RBP21.23■□□□□ 0.99
CPNE1-219ENST00000440240 LSM8O95777 96 aaKnown RBP21.23■□□□□ 0.99
CPNE1-219ENST00000440240 CKMT2P17540 419 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 RECQLP46063 649 aaPredicted RBP21.23■□□□□ 0.99
CPNE1-219ENST00000440240 SLC20A2Q08357 652 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 KCNMA1Q12791 1236 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 PIP5KL1Q5T9C9 394 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 ZNF783Q6ZMS7 281 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 ARCQ7LC44 396 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 KANSL1Q7Z3B3 1105 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 PDZD3Q86UT5 571 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 CLSTN2Q9H4D0 955 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 MPP6Q9NZW5 540 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 BAHCC1Q9P281 2608 aa21.23■□□□□ 0.99
CPNE1-219ENST00000440240 A0A0D9SEW6 157 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 A0A1W2PQU0 124 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 ILVBLA1L0T0 632 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 K7ERQ8 282 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 SRGAP2O75044 1071 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 CTSLP07711 333 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 RRM1P23921 792 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 COL9A2Q14055 689 aaPredicted RBP21.22■□□□□ 0.99
CPNE1-219ENST00000440240 DPCR1Q3MIW9 517 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 RETSATQ6NUM9 610 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 TFAP2DQ7Z6R9 452 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 TMEM145Q8NBT3 493 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 NAA15Q9BXJ9 866 aaKnown RBP21.22■□□□□ 0.99
CPNE1-219ENST00000440240 SNX10Q9Y5X0 201 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 FHOD1Q9Y613 1164 aa21.22■□□□□ 0.99
CPNE1-219ENST00000440240 A0A087WV48 116 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 SLC31A1O15431 190 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 SMAD6O43541 496 aaKnown RBP21.21■□□□□ 0.99
CPNE1-219ENST00000440240 UCHL3P15374 230 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 AKT2P31751 481 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 FLT3P36888 993 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 HSP90AA4PQ58FG1 418 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 CT47A1Q5JQC4 288 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-219ENST00000440240 TAF3Q5VWG9 929 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 LINGO4Q6UY18 593 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 ERN2Q76MJ5 926 aaKnown RBP21.21■□□□□ 0.99
CPNE1-219ENST00000440240 HORMAD1Q86X24 394 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 NXPE2Q96DL1 559 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 PPP1R16AQ96I34 528 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 SPON2Q9BUD6 331 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 HDAC8Q9BY41 377 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 STK33Q9BYT3 514 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 KLHL11Q9NVR0 708 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 CHMP5Q9NZZ3 219 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 IL36AQ9UHA7 158 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 TMEM59LQ9UK28 342 aa21.21■□□□□ 0.99
CPNE1-219ENST00000440240 NYNRINQ9P2P1 1898 aaKnown RBP21.21■□□□□ 0.99
CPNE1-219ENST00000440240 ARID1BQ8NFD5 2236 aaPredicted RBP21.21■□□□□ 0.99
CPNE1-219ENST00000440240 PCDH8O95206 1070 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 THEGLP0DJG4 465 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 TARDBPQ13148 414 aaKnown RBP eCLIP21.2■□□□□ 0.98
CPNE1-219ENST00000440240 ZNF284Q2VY69 593 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 HS1BP3Q53T59 392 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 ARSIQ5FYB1 569 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 FBXL19Q6PCT2 694 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 CACTIN-AS1Q8N1I8 211 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 FAM174AQ8TBP5 190 aa21.2■□□□□ 0.98
CPNE1-219ENST00000440240 ARRDC3Q96B67 414 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms