RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 MAGEA11P43364 429 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 GPR15P49685 360 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 ARPP19P56211 112 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 FAM189BP81408 668 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 TBCCQ15814 346 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 UGP2Q16851 508 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 PPM1JQ5JR12 505 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 WLSQ5T9L3 541 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 CES4AQ5XG92 561 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 FSTL4Q6MZW2 842 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 PKN3Q6P5Z2 889 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 C14orf80Q86SX3 495 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 C10orf107Q8IVU9 208 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 CCDC117Q8IWD4 279 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 ARHGAP24Q8N264 748 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 FAM13CQ8NE31 585 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 SPATA22Q8NHS9 363 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 CD99L2Q8TCZ2 262 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 DPF3Q92784 378 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 FBXO32Q969P5 355 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 AZIN2Q96A70 460 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 MCUR1Q96AQ8 359 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 PRR11Q96HE9 360 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 VPS39Q96JC1 886 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 AGAP2Q99490 1192 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 FSD1LQ9BXM9 530 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 NMUR2Q9GZQ4 415 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 STN1Q9H668 368 aaKnown RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 TLE6Q9H808 572 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 ZNF395Q9H8N7 513 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 STARD7Q9NQZ5 370 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 ENTPD7Q9NQZ7 604 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 CHRAC1Q9NRG0 131 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 OLA1Q9NTK5 396 aaKnown RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 RBM22Q9NW64 420 aaKnown RBP eCLIP10.61□□□□□ -0.711e-6■■□□□ 12.7
CPNE1-218ENST00000439806 TMEM161AQ9NX61 479 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 DONSONQ9NYP3 566 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 GMIPQ9P107 970 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 COPG2Q9UBF2 871 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.61□□□□□ -0.71
CPNE1-218ENST00000439806 NUMBLQ9Y6R0 609 aa10.61□□□□□ -0.71
CPNE1-218ENST00000439806 TTC3P53804 2025 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 A0A1W2PQ45 241 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 A0A1W2PQY0 241 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 KCNU1A8MYU2 1149 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 TMEM114B3SHH9 223 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 SPECC1L-ADORA2AF8WAN1 911 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 ITM2AO43736 263 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 H2AFYO75367 372 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 PMPCBO75439 489 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 RTN3O95197 1032 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 MT-CYBP00156 380 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 LMNAP02545 664 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 ENO1P06733 434 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 COL6A1P12109 1028 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 CPB1P15086 417 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 RHOQP17081 205 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 GRK4P32298 578 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 ABCG1P45844 678 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 PGFP49763 221 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 PAPOLAP51003 745 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 ALDH18A1P54886 795 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 ABCE1P61221 599 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 EFEMP1Q12805 493 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 NOGQ13253 232 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 THOC5Q13769 683 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 SEPT6Q14141 434 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 DDR2Q16832 855 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 MAP3K21Q5TCX8 1036 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 FAM171A1Q5VUB5 890 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 AFMIDQ63HM1 303 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 TRAF7Q6Q0C0 670 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 POTEHQ6S545 545 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 RINLQ6ZS11 566 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 RAPH1Q70E73 1250 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 LRRC8DQ7L1W4 858 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 TTC7BQ86TV6 843 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 ZNF354CQ86Y25 554 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 ZSCAN18Q8TBC5 510 aaPredicted RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 PIWIL2Q8TC59 973 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 NSMCE1Q8WV22 266 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 PTCD2Q8WV60 388 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 SCYL1Q96KG9 808 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.6□□□□□ -0.716e-9■□□□□ 10.4
CPNE1-218ENST00000439806 RHOJQ9H4E5 214 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 CAB39LQ9H9S4 337 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 SP110Q9HB58 689 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 MRM3Q9HC36 420 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 DNAJC28Q9NX36 388 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 MPP6Q9NZW5 540 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 DNAJB4Q9UDY4 337 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 TAGLN3Q9UI15 199 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 IPO11Q9UI26 975 aaKnown RBP10.6□□□□□ -0.71
CPNE1-218ENST00000439806 TLK1Q9UKI8 766 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 SLC39A10Q9ULF5 831 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 LRFN2Q9ULH4 789 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 TCAF1Q9Y4C2 921 aa10.6□□□□□ -0.71
CPNE1-218ENST00000439806 PCDHB7Q9Y5E2 793 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 203.1 ms