RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 HLA-DQB2P05538 268 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 PYGLP06737 847 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 IMPDH2P12268 514 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 CNTFP26441 200 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 CDC25CP30307 473 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 CCR1P32246 355 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 MAGEA8P43361 318 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 MRPS35P82673 323 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 TEDDM1Q5T9Z0 273 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 FSTL4Q6MZW2 842 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 C4orf50Q6ZRC1 276 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 KDELC2Q7Z4H8 507 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 CCNJLQ8IV13 435 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 IPMKQ8NFU5 416 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 APBB2Q92870 758 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 GLT1D1Q96MS3 346 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 CRISPLD1Q9H336 500 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 ATXN3LQ9H3M9 355 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 GMIPQ9P107 970 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 TRHDEQ9UKU6 1024 aa15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 HBS1LQ9Y450 684 aaKnown RBP15.46■□□□□ 0.07
SCAMP4-202ENST00000409472 E9PAM4 449 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 USP1O94782 785 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 HAUS5O94927 633 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 HOXC13P31276 330 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 MXRA7P84157 204 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 TCTN1Q2MV58 587 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 LRRC23Q53EV4 343 aaPredicted RBP15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 VARS2Q5ST30 1063 aaKnown RBP15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 ITPRIPL1Q6GPH6 555 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 TFAP2DQ7Z6R9 452 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 KCNMB4Q86W47 210 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 LMNTD2Q8IXW0 634 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 TNS4Q8IZW8 715 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 PTCD3Q96EY7 689 aaKnown RBP15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 NOL6Q9H6R4 1146 aaKnown RBP15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 SUDS3Q9H7L9 328 aaPredicted RBP15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 IARS2Q9NSE4 1012 aaKnown RBP15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 C20orf96Q9NUD7 363 aaPredicted RBP15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 SRRDQ9UH36 339 aa15.46■□□□□ 0.06
SCAMP4-202ENST00000409472 KCNU1A8MYU2 1149 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 FCHO1O14526 889 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 PROCP04070 461 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 GM2AP17900 193 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 TYK2P29597 1187 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 CHRNA4P43681 627 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 TUBP50607 506 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 ARPP19P56211 112 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 CUL3Q13618 768 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 POU6F1Q14863 301 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 TAF11Q15544 211 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 C10orf107Q8IVU9 208 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 HAPLN3Q96S86 360 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 CPNE1Q99829 537 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 OXCT2Q9BYC2 517 aaPredicted RBP15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 GPR62Q9BZJ7 368 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 BRD8Q9H0E9 1235 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 ACSS2Q9NR19 701 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 TXNDC16Q9P2K2 825 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 LAMA3Q16787 3333 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 DOCK4Q8N1I0 1966 aa15.45■□□□□ 0.06
SCAMP4-202ENST00000409472 MTSS1O43312 755 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 GLRA3O75311 464 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 OAZ2O95190 189 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 SKIP12755 728 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 RANBP1P43487 201 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 LIMK2P53671 638 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 AQP5P55064 265 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 ZBTB16Q05516 673 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 GPNMBQ14956 572 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 BRMS1LQ5PSV4 323 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 RSPO2Q6UXX9 243 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 TREML1Q86YW5 311 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 MOCOSQ96EN8 888 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 NAF1Q96HR8 494 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 FICDQ9BVA6 458 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 FNDC1Q4ZHG4 1894 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 MAGEA12P43365 314 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 CPA2P48052 419 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 NAB1Q13506 487 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 ATG16L1Q676U5 607 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 LHX8Q68G74 356 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 DENND5AQ6IQ26 1287 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 RFWD3Q6PCD5 774 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 KYAT3Q6YP21 454 aaKnown RBP15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 BEND5Q7L4P6 421 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 LONP2Q86WA8 852 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 TMEM173Q86WV6 379 aaPredicted RBP15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 PNPLA1Q8N8W4 532 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 FAM13CQ8NE31 585 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 FBXO27Q8NI29 283 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 VAT1Q99536 393 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 SOX13Q9UN79 622 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 SLC27A5Q9Y2P5 690 aa15.44■□□□□ 0.06
SCAMP4-202ENST00000409472 BIRC5O15392 142 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 CACNG3O60359 315 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 NBNO60934 754 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 PMPCBO75439 489 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 CNTN5O94779 1100 aa15.43■□□□□ 0.06
SCAMP4-202ENST00000409472 CDH17Q12864 832 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms