RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 FAM45BPQ6NSW5 357 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 PACS1Q6VY07 963 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 STK32CQ86UX6 486 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 TOP6BLQ8N6T0 577 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 FAM45AQ8TCE6 357 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 PHF21AQ96BD5 680 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 CAMKK2Q96RR4 588 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 PIF1Q9H611 641 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 COPS7BQ9H9Q2 264 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.32■□□□□ 0.362e-8■■■□□ 14.8
TRAPPC11-201ENST00000334690 TCRBV7S2A1N4TA0A589 114 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 STK25O00506 426 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 CNOT3O75175 753 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 GRIA4P48058 902 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 RAB10P61026 200 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 HSDL1Q3SXM5 330 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC25A52Q3SY17 297 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 ARMC12Q5T9G4 340 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 TSHZ1Q6ZSZ6 1077 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 FIG4Q92562 907 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 TMEM159Q96B96 161 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 P2RY11Q96G91 374 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 PAWRQ96IZ0 340 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 DUSP16Q9BY84 665 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 CIPCQ9C0C6 399 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 RNPEPQ9H4A4 650 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 RNF19AQ9NV58 838 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 ATP5C1P36542 298 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 CDKN2BP42772 138 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 BEX3Q00994 111 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 KRR1Q13601 381 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZNF572Q7Z3I7 529 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 RP9Q8TA86 221 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZNF384Q8TF68 577 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 ALG9Q9H6U8 611 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 NOCTQ9UK39 431 aaKnown RBP17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 COQ4Q9Y3A0 265 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 SIGLEC1Q9BZZ2 1709 aa17.32■□□□□ 0.36
TRAPPC11-201ENST00000334690 TBKBP1A7MCY6 615 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 AGPSO00116 658 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 SEC22BO75396 215 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 FBXW4P57775 412 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 BCL2L1Q07817 233 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 ASTE1Q2TB18 679 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 LBX2Q6XYB7 198 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 CAMK1DQ8IU85 385 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC44A2Q8IWA5 706 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 NTPCRQ9BSD7 190 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 BBS2Q9BXC9 721 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 FAM50BQ9Y247 325 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 CILPO75339 1184 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 IGSF6O95976 241 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 OR56A5P0C7T3 313 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 CRYBB1P53674 252 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 TTC27Q6P3X3 843 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 CYP4Z1Q86W10 505 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 PCDH20Q8N6Y1 951 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 ABHD8Q96I13 439 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 UXTQ9UBK9 157 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 LIMD1Q9UGP4 676 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 RGS14O43566 566 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 TSPAN3O60637 253 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 GJB1P08034 283 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 SNRPB2P08579 225 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 FGFR1P11362 822 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 TFEBP19484 476 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 FMO4P31512 558 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 IL5RAQ01344 420 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 RIPK1Q13546 671 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 PFKFB4Q16877 469 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 SWT1Q5T5J6 900 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 LIPMQ5VYY2 423 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZDHHC13Q8IUH4 622 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 SLC4A11Q8NBS3 891 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 SETD9Q8NE22 299 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZYG11BQ9C0D3 744 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 SNX15Q9NRS6 342 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 AHSPQ9NZD4 102 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 OPTCQ9UBM4 332 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 COL1A2P08123 1366 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 CST3P01034 146 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 TPSB2P20231 275 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 MRPL28Q13084 256 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 TPSAB1Q15661 275 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 LACTB2Q53H82 288 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 GLMNQ92990 594 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 YME1L1Q96TA2 773 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 GPR20Q99678 358 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 ZCCHC2Q9C0B9 1178 aaKnown RBP17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 PLA2G4CQ9UP65 541 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 RIPK3Q9Y572 518 aa17.31■□□□□ 0.36
TRAPPC11-201ENST00000334690 TRAFD1O14545 582 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 AVILO75366 819 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 BPGMP07738 259 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 OCM2P0CE71 109 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 OCMP0CE72 109 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 ITGB6P18564 788 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 GRK3P35626 688 aa17.3■□□□□ 0.36
TRAPPC11-201ENST00000334690 KRT20P35900 424 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms