RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 AP3M2P53677 418 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 ARHGAP8P85298 464 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 RELAQ04206 551 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 PRKD1Q15139 912 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CCDC92Q53HC0 331 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 VARS2Q5ST30 1063 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 OR6B2Q6IFH4 312 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 COLGALT2Q8IYK4 626 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 KATNAL2Q8IYT4 538 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 EMC1Q8N766 993 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 ADAM32Q8TC27 787 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 PRPF18Q99633 342 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 MRPL1Q9BYD6 325 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 FOXP3Q9BZS1 431 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 PPARGC1AQ9UBK2 798 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 MARCOQ9UEW3 520 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TSPAN16Q9UKR8 245 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 NME7Q9Y5B8 376 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CITO14578 2027 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 LSM1O15116 133 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 AP1G1O43747 822 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CXCL14O95715 111 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 MT-ND3P03897 115 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 KCNE1P15382 129 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 IRS1P35568 1242 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CPOXP36551 454 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 GPX6P59796 221 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 PPP2R2DQ66LE6 453 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 SPOCD1Q6ZMY3 1216 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 UBE2Q1Q7Z7E8 422 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 PRPF39Q86UA1 669 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 LRRTM3Q86VH5 581 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TTC13Q8NBP0 860 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 OR10T2Q8NGX3 314 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 GRIN3AQ8TCU5 1115 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 GIPC3Q8TF64 312 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 DDX1Q92499 740 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TMEM176AQ96HP8 235 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CYP4F11Q9HBI6 524 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TMLHEQ9NVH6 421 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 NDUFA13Q9P0J0 144 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CEPT1Q9Y6K0 416 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 ARHGAP42A6NI28 874 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 PIRO00625 290 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 DNAJA2O60884 412 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 BEST1O76090 585 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 FGF18O76093 207 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CXCL10P02778 98 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 ZFXP17010 805 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 CDH2P19022 906 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 NFKBIAP25963 317 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 SSTR1P30872 391 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 NDUFV1P49821 464 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 EPHB1P54762 984 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 ALDH18A1P54886 795 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TAP1Q03518 808 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TAF5Q15542 800 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TGFBIQ15582 683 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 ZBTB6Q15916 424 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 KYAT1Q16773 422 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 GRAMD1BQ3KR37 738 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TFDP3Q5H9I0 405 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 PSRC1Q6PGN9 363 aaPredicted RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 C15orf39Q6ZRI6 1047 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 MRPL10Q7Z7H8 261 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TDRPQ86YL5 185 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 ARHGAP24Q8N264 748 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 BHMTQ93088 406 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 TTC17Q96AE7 1141 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 MECRQ9BV79 373 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 SHCBP1LQ9BZQ2 653 aa10.54□□□□□ -0.72
ABCF1-201ENST00000326195 NGRNQ9NPE2 291 aaKnown RBP10.54□□□□□ -0.72
ABCF1-201ENST00000326195 NCOR1O75376 2440 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 TMX2-CTNND1H3BSU7 103 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 FBP2O00757 339 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 PRRG1O14668 218 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 GJA1P17302 382 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 PCBP1Q15365 356 aaKnown RBP eCLIP10.53□□□□□ -0.723e-9■■■■■ 30.2
ABCF1-201ENST00000326195 KIAA0319Q5VV43 1072 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 DCLRE1AQ6PJP8 1040 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 RSPO2Q6UXX9 243 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-201ENST00000326195 PCGF5Q86SE9 256 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 RELL1Q8IUW5 271 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 ZCCHC9Q8N567 271 aaKnown RBP10.53□□□□□ -0.72
ABCF1-201ENST00000326195 C12orf76Q8N812 135 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-201ENST00000326195 ATP11CQ8NB49 1132 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 PIP4K2CQ8TBX8 421 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 CNBD2Q96M20 576 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 FAM111AQ96PZ2 611 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 GPAMQ9HCL2 828 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 SAE1Q9UBE0 346 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-201ENST00000326195 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 KNL1Q8NG31 2342 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 DNALI1O14645 258 aaPredicted RBP10.53□□□□□ -0.72
ABCF1-201ENST00000326195 NDUFB5O43674 189 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 HMBSP08397 361 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 ABHD2P08910 425 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 CD48P09326 243 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 RBP3P10745 1247 aa10.53□□□□□ -0.72
ABCF1-201ENST00000326195 ODC1P11926 461 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms