RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 ORC1Q13415 861 aa17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 ZNF699Q32M78 642 aa17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 DCAF6Q58WW2 860 aa17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 SEL1L3Q68CR1 1132 aa17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 RXFP2Q8WXD0 754 aa17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 GATA5Q9BWX5 397 aaPredicted RBP17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 C20orf96Q9NUD7 363 aaPredicted RBP17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 SNX13Q9Y5W8 968 aa17.99■□□□□ 0.47
CDKN1B-201ENST00000228872 KPNA7A9QM74 516 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 RAP1GAPP47736 663 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 NHSL2Q5HYW2 709 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 XKR5Q6UX68 686 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 SLCO4A1Q96BD0 722 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 MS4A4AQ96JQ5 239 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 MARK4Q96L34 752 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 ZBTB26Q9HCK0 441 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 TXNRD2Q9NNW7 524 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 ADA2Q9NZK5 511 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 H3BMQ9 156 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 LTFP02788 710 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 PSAPP07602 524 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 GP5P40197 560 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 GARSP41250 739 aaKnown RBP17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 MAGEA12P43365 314 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 GTF2A2P52657 109 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 HMBOX1Q6NT76 420 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 CCDC60Q8IWA6 550 aaPredicted RBP17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 DCLK2Q8N568 766 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 CNTD1Q8N815 330 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 C2orf69Q8N8R5 385 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 RNF169Q8NCN4 708 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 ADAMTS16Q8TE57 1224 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 CHPT1Q8WUD6 406 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 COG8Q96MW5 612 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 PCDHAC1Q9H158 963 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 PIH1D1Q9NWS0 290 aaKnown RBP17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 TXNDC16Q9P2K2 825 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 SUCOQ9UBS9 1254 aaKnown RBP17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 RAP2CQ9Y3L5 183 aa17.98■□□□□ 0.47
CDKN1B-201ENST00000228872 TCAF2A6NFQ2 919 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 C2CD4BA6NLJ0 364 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 F5H423 210 aaPredicted RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 GIPC1O14908 333 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 GRID2O43424 1007 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 BAIAP3O94812 1187 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 PDGFRAP16234 1089 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 PGAM1P18669 254 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 UGT1A6P19224 532 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 UGT1A1P22309 533 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 UGT1A4P22310 534 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 UGT1A3P35503 534 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 UGT1A5P35504 534 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 PRAMEP78395 509 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 RHDQ02161 417 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 STXBP2Q15833 593 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 HERC6Q8IVU3 1022 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 KCNN1Q92952 543 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 MOCOSQ96EN8 888 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 TRNAU1APQ9NX07 287 aaKnown RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 A0A1W2PPW3 197 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 SPATA31C2B4DYI2 1134 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 H2AFYO75367 372 aaKnown RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 EDNRBP24530 442 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 MGAT1P26572 445 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 ICAM3P32942 547 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 SESN2P58004 480 aaPredicted RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 ACTR2P61160 394 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 KCNC4Q03721 635 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 ATP1A4Q13733 1029 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 TRIM25Q14258 630 aaKnown RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 CA9Q16790 459 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 NIPAL1Q6NVV3 410 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 SCYL2Q6P3W7 929 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 C16orf87Q6PH81 154 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 ZNF786Q8N393 782 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 SREK1Q8WXA9 508 aaKnown RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 TFAP2CQ92754 450 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 UHRF1Q96T88 793 aaPredicted RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 MPHOSPH6Q99547 160 aaKnown RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 DOK1Q99704 481 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 XYLT2Q9H1B5 865 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 CXorf21Q9HAI6 301 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 ACSS2Q9NR19 701 aa17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 KIAA1522Q9P206 1035 aaPredicted RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 NXF1Q9UBU9 619 aaKnown RBP17.97■□□□□ 0.47
CDKN1B-201ENST00000228872 CLASP2O75122 1294 aaKnown RBP17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 MICAL2O94851 1124 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 ERVK-10P10266 1014 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 CD247P20963 164 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 CDH3P22223 829 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 NAMPTP43490 491 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 CCR10P46092 362 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 RPL14P50914 215 aaKnown RBP17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 NSUN2Q08J23 767 aaKnown RBP eCLIP17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 DUOXA2Q1HG44 320 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 NXNQ6DKJ4 435 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 ISL2Q96A47 359 aa17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 NPLQ9BXD5 320 aaPredicted RBP17.96■□□□□ 0.47
CDKN1B-201ENST00000228872 PTBP2Q9UKA9 531 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms