RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 RBM12Q9NTZ6 932 aaKnown RBP20.04■□□□□ 0.8
CIRBP-220ENST00000588917 SLC25A13Q9UJS0 675 aa20.04■□□□□ 0.8
CIRBP-220ENST00000588917 JRKLQ9Y4A0 524 aa20.04■□□□□ 0.8
CIRBP-220ENST00000588917 MYO15AQ9UKN7 3530 aa20.04■□□□□ 0.8
CIRBP-220ENST00000588917 MYOFQ9NZM1 2061 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 A0A0D9SEW6 157 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 RASA4BC9J798 803 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 RASA4O43374 803 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 PI15O43692 258 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 KDELR3O43731 214 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 DCNP07585 359 aaKnown RBP20.03■□□□□ 0.8
CIRBP-220ENST00000588917 PAFAH1B3Q15102 231 aaKnown RBP20.03■□□□□ 0.8
CIRBP-220ENST00000588917 PPP2R5EQ16537 467 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 TAZQ16635 292 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 EMC10Q5UCC4 262 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 MFSD7Q6UXD7 560 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 SPOCD1Q6ZMY3 1216 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 METTL3Q86U44 580 aaKnown RBP20.03■□□□□ 0.8
CIRBP-220ENST00000588917 ZNF354CQ86Y25 554 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 CHPFQ8IZ52 775 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 SPEM1Q8N4L4 309 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 OR52K2Q8NGK3 314 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 RPLP0P6Q8NHW5 317 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 LRRC19Q9H756 370 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 SUN2Q9UH99 717 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 ERVW-1Q9UQF0 538 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 RAD54BQ9Y620 910 aa20.03■□□□□ 0.8
CIRBP-220ENST00000588917 CBX4O00257 560 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 CDKN2BP42772 138 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 AFMIDQ63HM1 303 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 ASCL5Q7RTU5 278 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 RFX6Q8HWS3 928 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 IL17RCQ8NAC3 791 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 OR7D4Q8NG98 312 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 SLC39A8Q9C0K1 460 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 DLGAP2Q9P1A6 1054 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 COL4A3Q01955 1670 aa20.02■□□□□ 0.8
CIRBP-220ENST00000588917 RIF1Q5UIP0 2472 aaKnown RBP20.02■□□□□ 0.8
CIRBP-220ENST00000588917 PRR23AA6NEV1 266 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 APOL1O14791 398 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 MX2P20592 715 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 MARCKSL1P49006 195 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 NR2C2P49116 596 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 SERINC3Q13530 473 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 ZNF234Q14588 700 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 FNDC3BQ53EP0 1204 aaKnown RBP20.01■□□□□ 0.79
CIRBP-220ENST00000588917 ZNF569Q5MCW4 686 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 EGFLAMQ63HQ2 1017 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 SLC9A4Q6AI14 798 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 SYT13Q7L8C5 426 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 SFTPA1Q8IWL2 248 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 CASKIN2Q8WXE0 1202 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 PSMB7Q99436 277 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 KLC2Q9H0B6 622 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 NOL6Q9H6R4 1146 aaKnown RBP20.01■□□□□ 0.79
CIRBP-220ENST00000588917 VPS51Q9UID3 782 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 MMP17Q9ULZ9 603 aa20.01■□□□□ 0.79
CIRBP-220ENST00000588917 PACSIN2Q9UNF0 486 aaPredicted RBP20.01■□□□□ 0.79
CIRBP-220ENST00000588917 KIAA1549LQ6ZVL6 1849 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 DDX3YO15523 660 aaKnown RBP20■□□□□ 0.79
CIRBP-220ENST00000588917 ZBTB24O43167 697 aaPredicted RBP20■□□□□ 0.79
CIRBP-220ENST00000588917 TJP3O95049 919 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 KLF8O95600 359 aaPredicted RBP20■□□□□ 0.79
CIRBP-220ENST00000588917 PTPN7P35236 360 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 ACVRL1P37023 503 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 PAPOLAP51003 745 aaKnown RBP20■□□□□ 0.79
CIRBP-220ENST00000588917 CCR3P51677 355 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 CLCN6P51797 869 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 ENPP2Q13822 863 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 PTPRNQ16849 979 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 NCBP2-AS2Q69YL0 99 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 SERPINA13PQ6UXR4 307 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 ALLCQ8N6M5 410 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 PQLC3Q8N755 202 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 DTWD2Q8NBA8 298 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 TXNDC5Q8NBS9 432 aaKnown RBP20■□□□□ 0.79
CIRBP-220ENST00000588917 CYB5D2Q8WUJ1 264 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 ALG3Q92685 438 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 NKD2Q969F2 451 aaPredicted RBP20■□□□□ 0.79
CIRBP-220ENST00000588917 HMCESQ96FZ2 354 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 CELF6Q96J87 481 aaKnown RBP20■□□□□ 0.79
CIRBP-220ENST00000588917 GABRG3Q99928 467 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 ETNK2Q9NVF9 386 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 HS3ST2Q9Y278 367 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 STON1Q9Y6Q2 735 aa20■□□□□ 0.79
CIRBP-220ENST00000588917 hCG_1818297A0A087WSY0 165 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 DFFAO00273 331 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 SYNCRIPO60506 623 aaKnown RBP19.99■□□□□ 0.79
CIRBP-220ENST00000588917 CST8O60676 142 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 ZMPSTE24O75844 475 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 PYGMP11217 842 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 TGM2P21980 687 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 CXCL12P48061 93 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 STARD3Q14849 445 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 INO80DQ53TQ3 878 aaPredicted RBP19.99■□□□□ 0.79
CIRBP-220ENST00000588917 TMCO4Q5TGY1 634 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 Q6ZS52 159 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 ARHGAP12Q8IWW6 846 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 PLD5Q8N7P1 536 aa19.99■□□□□ 0.79
CIRBP-220ENST00000588917 ATP11CQ8NB49 1132 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms