RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-208	ENST00000578178	ASCC3	Q8N3C0	2202 aa	Known RBP	11.21	□□□□□ -0.62
PPP4R1-208	ENST00000578178	LAMA1	P25391	3075 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178		A0A0D9SEW6	157 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178		A0A1B0GTW7	788 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178		A0A1W2PP55	124 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178		A0A1W2PQJ5	194 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MED19	A0JLT2	244 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TMCO5B	A8MYB1	307 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DDX3X	O00571	662 aa	Known RBP eCLIP	11.2	□□□□□ -0.62	5e-13	■■■■■ 40.6
PPP4R1-208	ENST00000578178	CDX4	O14627	284 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TM4SF5	O14894	197 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ATMIN	O43313	823 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SNAP91	O60641	907 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GZMA	P12544	262 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SRC	P12931	536 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	C5AR1	P21730	350 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MAOB	P27338	520 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SLC8A1	P32418	973 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MAPK8	P45983	427 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MAPKAPK2	P49137	400 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CLCN6	P51797	869 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ATXN3	P54252	364 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GFPT1	Q06210	699 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DLG2	Q15700	870 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ACCSL	Q4AC99	568 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TDRD12	Q587J7	1177 aa	Known RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PPM1J	Q5JR12	505 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	EFHC2	Q5JST6	749 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RWDD4	Q6NW29	188 aa	Known RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178		Q6ZVU0	165 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	DRC7	Q8IY82	874 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OR7D4	Q8NG98	312 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SNX19	Q92543	992 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TBC1D31	Q96DN5	1066 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM129B	Q96TA1	746 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CNPY3	Q9BT09	278 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MIR1-1HG	Q9H1L0	117 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RETREG1	Q9H6L5	497 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FSCN3	Q9NQT6	498 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PARVA	Q9NVD7	372 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TMEM248	Q9NWD8	314 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	IFNK	Q9P0W0	207 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ADAMTS1	Q9UHI8	967 aa		11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.2	□□□□□ -0.62
PPP4R1-208	ENST00000578178	C1QTNF3-AMACR	E9PGA6	284 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM72C	H0Y354	149 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ALOX15B	O15296	676 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RNASEH2A	O75792	299 aa	Known RBP	11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	LRIG2	O94898	1065 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	IL1B	P01584	269 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TPM3	P06753	285 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SYP	P08247	313 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PLEK	P08567	350 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RHOQ	P17081	205 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ETFB	P38117	255 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	AIF1	P55008	147 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OGDH	Q02218	1023 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GNA12	Q03113	381 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MAMLD1	Q13495	774 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM72A	Q5TYM5	149 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	KIAA0895L	Q68EN5	471 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PLEKHA7	Q6IQ23	1121 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM72D	Q6L9T8	149 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SCYL2	Q6P3W7	929 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	C22orf39	Q6P5X5	142 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TMC6	Q7Z403	805 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SLFN11	Q7Z7L1	901 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	NLRP14	Q86W24	1093 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FAM72B	Q86X60	149 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	HDDC3	Q8N4P3	179 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	AADAT	Q8N5Z0	425 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ATP11C	Q8NB49	1132 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SYN2	Q92777	582 aa	Predicted RBP	11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TRIM11	Q96F44	468 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CCDC114	Q96M63	670 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	OMD	Q99983	421 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GTPBP2	Q9BX10	602 aa	Known RBP	11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ATP13A1	Q9HD20	1204 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	EIF2B4	Q9UI10	523 aa	Known RBP	11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PLXNA2	O75051	1894 aa		11.19	□□□□□ -0.62
PPP4R1-208	ENST00000578178	TP53BP1	Q12888	1972 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	LRRC72	A6NJI9	287 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178		K7ERQ8	282 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	CBX4	O00257	560 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ARHGAP33	O14559	1287 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MCF2L	O15068	1137 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	BCAT2	O15382	392 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	BNIP3L	O60238	219 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	RTN2	O75298	545 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	ZMPSTE24	O75844	475 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FSBP	O95073	299 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MT-CO1	P00395	513 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	FTL	P02792	175 aa	Predicted RBP	11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GYPC	P04921	128 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	MYBL1	P10243	752 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	SKIL	P12757	684 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GOT1	P17174	413 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	GLDC	P23378	1020 aa		11.18	□□□□□ -0.62
PPP4R1-208	ENST00000578178	PSMA2	P25787	234 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms