RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 DSTYKQ6XUX3 929 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 TTC39CQ8N584 583 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 OR6J1Q8NGC5 347 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CFAP61Q8NHU2 1237 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 FBXO41Q8TF61 875 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CDCA5Q96FF9 252 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 GAS2L1Q99501 681 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 LGMNQ99538 433 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 FERMT1Q9BQL6 677 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 EIF2AQ9BY44 585 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 GCOM2Q9BZD3 368 aaPredicted RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 NMUR2Q9GZQ4 415 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 GOLGA2P5Q9HBQ8 144 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 LRRC4Q9HBW1 653 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 SSU72Q9NP77 194 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 PIN4Q9Y237 131 aaKnown RBP5.5□□□□□ -1.53
VAPA-203ENST00000577539 C2CD2Q9Y426 696 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 TTLL3Q9Y4R7 772 aa5.5□□□□□ -1.53
VAPA-203ENST00000577539 CAPN9O14815 690 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 PEX11AO75192 247 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 RECQL4O94761 1208 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 UPP2O95045 317 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 PFKMP08237 780 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 GOT1P17174 413 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 HOXB4P17483 251 aaPredicted RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 SAT1P21673 171 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 IL4RP24394 825 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 ACAT1P24752 427 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 PGM1P36871 562 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 AQP5P55064 265 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 SLC8A3P57103 927 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 RPL10AP62906 217 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 STX3Q13277 289 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 RCN1Q15293 331 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 KYAT1Q16773 422 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 OLFML1Q6UWY5 402 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 C1orf229Q6ZS94 237 aaPredicted RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 CAND1Q86VP6 1230 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 GPRC5AQ8NFJ5 357 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 GSDMBQ8TAX9 411 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 SLC2A14Q8TDB8 520 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 CDKL2Q92772 493 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 PGBD4Q96DM1 585 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 OXNAD1Q96HP4 312 aaPredicted RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 ZMAT2Q96NC0 199 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 ZNF570Q96NI8 536 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 TBCBQ99426 244 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 DHRS4Q9BTZ2 278 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 NXF3Q9H4D5 531 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 CCDC86Q9H6F5 360 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 SOX17Q9H6I2 414 aaPredicted RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 ZFYVE1Q9HBF4 777 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 POPDC2Q9HBU9 364 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 SAR1AQ9NR31 198 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 SMYD2Q9NRG4 433 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 DNAJB12Q9NXW2 375 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 IL1RAPL1Q9NZN1 696 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 FETUBQ9UGM5 382 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 PCDHB10Q9UN67 800 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 PSME4Q14997 1843 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 SSC5DA1L4H1 1573 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 CCDC78A2IDD5 438 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 ARHGAP42A6NI28 874 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 SLC15A5A6NIM6 579 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 NEBLO76041 1014 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 BAG2O95816 211 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 TSHRP16473 764 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 LMO2P25791 158 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 RAB27AP51159 221 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 INCA1Q0VD86 236 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 KPNB1Q14974 876 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 FXNQ16595 210 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 CCDC142Q17RM4 750 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 SOWAHAQ2M3V2 549 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.49□□□□□ -1.53
VAPA-203ENST00000577539 C6orf163Q5TEZ5 329 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 PID1Q7Z2X4 250 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 LMNTD2Q8IXW0 634 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 CHPFQ8IZ52 775 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 DEFB106AQ8N104 65 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 CCDC185Q8N715 623 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 ZNF398Q8TD17 642 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 MZB1Q8WU39 189 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 NAF1Q96HR8 494 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 EBNA1BP2Q99848 306 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 BTBD10Q9BSF8 475 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 TUBB6Q9BUF5 446 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 CADM1Q9BY67 442 aaKnown RBP5.49□□□□□ -1.53
VAPA-203ENST00000577539 SHCBP1LQ9BZQ2 653 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.49□□□□□ -1.53
VAPA-203ENST00000577539 NUMBLQ9Y6R0 609 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 KCNK1O00180 336 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 USP12O75317 370 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 KRT36O76013 467 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 GM2AP17900 193 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 MGAT1P26572 445 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 PEX19P40855 299 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 ABCG1P45844 678 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 NEK3P51956 506 aa5.49□□□□□ -1.53
VAPA-203ENST00000577539 GTF2A2P52657 109 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms