RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 GOLGA6L7A0A1B0GV03 622 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 TYW5A2RUC4 315 aaKnown RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 SOBPA7XYQ1 873 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 BANF1O75531 89 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 NFKB1P19838 968 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 DDX6P26196 483 aaKnown RBP eCLIP14.07□□□□□ -0.16
TPM1-215ENST00000558868 HOXA9P31269 272 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 ETFBP38117 255 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 PLA2G5P39877 138 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 SLCO1A2P46721 670 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 CLCN4P51793 760 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 GEMP55040 296 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 GEMIN4P57678 1058 aaKnown RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 PPP2R2AP63151 447 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 SKIDA1Q1XH10 827 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 FAM133BQ5BKY9 247 aaKnown RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 TNFAIP8L3Q5GJ75 292 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 SYCP2LQ5T4T6 812 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 NAPEPLDQ6IQ20 393 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 ZNF534Q76KX8 674 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 ZNF354CQ86Y25 554 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 TMC8Q8IU68 726 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 KLHDC8BQ8IXV7 354 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 ZSCAN18Q8TBC5 510 aaPredicted RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 FBF1Q8TES7 1133 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 STAMBPL1Q96FJ0 436 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 HMCESQ96FZ2 354 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 LRCH3Q96II8 777 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 SIGLEC10Q96LC7 697 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 ZNF599Q96NL3 588 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 TGS1Q96RS0 853 aaKnown RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 C17orf80Q9BSJ5 609 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 NOL6Q9H6R4 1146 aaKnown RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 GKN1Q9NS71 199 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 NDFIP2Q9NV92 336 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 RBM22Q9NW64 420 aaKnown RBP eCLIP14.07□□□□□ -0.16
TPM1-215ENST00000558868 ZNF212Q9UDV6 495 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 RABGEF1Q9UJ41 708 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 AGO1Q9UL18 857 aaKnown RBP14.07□□□□□ -0.16
TPM1-215ENST00000558868 PCDHA11Q9Y5I1 949 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 MAD1L1Q9Y6D9 718 aa14.07□□□□□ -0.16
TPM1-215ENST00000558868 DOCK4Q8N1I0 1966 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.06□□□□□ -0.16
TPM1-215ENST00000558868 A0A1B0GVM2 712 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 MAGEB16A2A368 324 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 TCAF2A6NFQ2 919 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 XYLBO75191 536 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 AVILO75366 819 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 HNRNPA1P09651 372 aaKnown RBP eCLIP14.06□□□□□ -0.16
TPM1-215ENST00000558868 IRF1P10914 325 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 PTPN2P17706 415 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 SSTR1P30872 391 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 SLC6A4P31645 630 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 CD68P34810 354 aaPredicted RBP14.06□□□□□ -0.16
TPM1-215ENST00000558868 MSH2P43246 934 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 NPY2RP49146 381 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 IRAK1P51617 712 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 GYS2P54840 703 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 SLC7A9P82251 487 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 TNK2Q07912 1038 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ZNF177Q13360 481 aaPredicted RBP14.06□□□□□ -0.16
TPM1-215ENST00000558868 SERINC3Q13530 473 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 TERF2Q15554 542 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ARHGAP15Q53QZ3 475 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 TMCO4Q5TGY1 634 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 MARC1Q5VT66 337 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 KCTD11Q693B1 232 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ZNF783Q6ZMS7 281 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ARHGAP36Q6ZRI8 547 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 CAPN12Q6ZSI9 719 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 CYS1Q717R9 158 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 SETD3Q86TU7 594 aaPredicted RBP14.06□□□□□ -0.16
TPM1-215ENST00000558868 BBS5Q8N3I7 341 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ARL14EPQ8N8R7 260 aaPredicted RBP14.06□□□□□ -0.16
TPM1-215ENST00000558868 USP33Q8TEY7 942 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 CFAP36Q96G28 342 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 LRRC3Q9BY71 257 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ATXN3LQ9H3M9 355 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 CASS4Q9NQ75 786 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 BFARQ9NZS9 450 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 SENP1Q9P0U3 644 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 SAMD15Q9P1V8 674 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 PSMC3IPQ9P2W1 217 aaPredicted RBP14.06□□□□□ -0.16
TPM1-215ENST00000558868 ZMYM5Q9UJ78 669 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ACTL7BQ9Y614 415 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 IKBKGQ9Y6K9 419 aa14.06□□□□□ -0.16
TPM1-215ENST00000558868 ZFP37Q9Y6Q3 630 aaPredicted RBP14.06□□□□□ -0.16
TPM1-215ENST00000558868 NUP205Q92621 2012 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 ILVBLA1L0T0 632 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 HIDE1A8MVS5 230 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 F5H423 210 aaPredicted RBP14.05□□□□□ -0.16
TPM1-215ENST00000558868 POC1B-GALNT4F8VUJ3 575 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 KLKB1P03952 638 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 POU2F2P09086 479 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 MYL4P12829 197 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 PGAM1P18669 254 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 DNAJB1P25685 340 aa14.05□□□□□ -0.16
TPM1-215ENST00000558868 HPDP32754 393 aaPredicted RBP14.05□□□□□ -0.16
TPM1-215ENST00000558868 ERVK-21P61565 698 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms