RNA–Protein interactions for RNA: ENST00000557768.1

HNRNPC-233, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-233ENST00000557768 MLF2Q15773 248 aaPredicted RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 PDCD2Q16342 344 aaPredicted RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 PSMD5Q16401 504 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 SLC44A4Q53GD3 710 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 EARS2Q5JPH6 523 aaKnown RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 LIN9Q5TKA1 542 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 PPP4R3AQ6IN85 833 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 SLC27A1Q6PCB7 646 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 PIK3AP1Q6ZUJ8 805 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 MAEAQ7L5Y9 396 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 NEK8Q86SG6 692 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 SLC41A1Q8IVJ1 513 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 KBTBD2Q8IY47 623 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 HACE1Q8IYU2 909 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 KLHL36Q8N4N3 616 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 LNX1Q8TBB1 728 aaPredicted RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 CALML6Q8TD86 181 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 MBD6Q96DN6 1003 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 CDK5RAP3Q96JB5 506 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 EIF2AK1Q9BQI3 630 aaKnown RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 TTPALQ9BTX7 342 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 DDX23Q9BUQ8 820 aaKnown RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 PLA2G2FQ9BZM2 168 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 POLR3FQ9H1D9 316 aaPredicted RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 MTG2Q9H4K7 406 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 DMRT3Q9NQL9 472 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 DLL3Q9NYJ7 618 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 FBXW11Q9UKB1 542 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 PCDHB6Q9Y5E3 794 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 SNX13Q9Y5W8 968 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 ZFP37Q9Y6Q3 630 aaPredicted RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 SF3B1O75533 1304 aaKnown RBP eCLIP5.89□□□□□ -1.475e-6■■■■■ 78.7
HNRNPC-233ENST00000557768 NUP210Q8TEM1 1887 aaPredicted RBP5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 TCHHQ07283 1943 aa5.89□□□□□ -1.47
HNRNPC-233ENST00000557768 EPG5Q9HCE0 2579 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 A0A1B0GUA9 196 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 LRRIQ4A6NIV6 560 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 I3L4J1 428 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 PTGESO14684 152 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 KPNA5O15131 536 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 BAG4O95429 457 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 PLATP00750 562 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 HNRNPA1P09651 372 aaKnown RBP eCLIP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 XPAP23025 273 aaPredicted RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 OR1D2P34982 312 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 WASP42768 502 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 MAP2K6P52564 334 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 POLD3Q15054 466 aaPredicted RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 ZNF528Q3MIS6 628 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 ALFQ53S48 1182 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 THEMIS2Q5TEJ8 643 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CCDC70Q6NSX1 233 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CPLX2Q6PUV4 134 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 TPRG1Q6ZUI0 275 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 MTSS1LQ765P7 747 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CENPQQ7L2Z9 268 aaPredicted RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 GPR65Q8IYL9 337 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 OR2C3Q8N628 320 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 PIGOQ8TEQ8 1089 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 ATRIPQ8WXE1 791 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CCT6BQ92526 530 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 RGMAQ96B86 450 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 MCRS1Q96EZ8 462 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 ZNF274Q96GC6 653 aaPredicted RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CCDC43Q96MW1 224 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 HSD17B14Q9BPX1 270 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 VPS11Q9H270 941 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 ANKEF1Q9NU02 776 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 DNMT3BQ9UBC3 853 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 EVLQ9UI08 416 aaPredicted RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 FBXO4Q9UKT5 387 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 PCDHA12Q9UN75 941 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 GTF2A1LQ9UNN4 478 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CORO2BQ9UQ03 480 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 PCDHA13Q9Y5I0 950 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CYP46A1Q9Y6A2 500 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 CFAP20Q9Y6A4 193 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 TPRP12270 2363 aaKnown RBP5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 ACACBO00763 2458 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 OBSL1O75147 1896 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 MYO16Q9Y6X6 1858 aa5.88□□□□□ -1.47
HNRNPC-233ENST00000557768 F5P12259 2224 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 USO1O60763 962 aaKnown RBP5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 RECQL4O94761 1208 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 REC8O95072 547 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 ITGB3P05106 788 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 EDN1P05305 212 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 THP07101 528 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 CENPBP07199 599 aaPredicted RBP5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 TNFSF4P23510 183 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 HOXA9P31269 272 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 RARRES1P49788 294 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 RENBPP51606 427 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 ATXN1P54253 815 aaKnown RBP5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 IL13RA1P78552 427 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 MTAPQ13126 283 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 PRPF4BQ13523 1007 aaKnown RBP5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 NOMO1Q15155 1222 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 NAB2Q15742 525 aa5.87□□□□□ -1.47
HNRNPC-233ENST00000557768 CALCRLQ16602 461 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms