RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 C6orf106Q9H6K1 298 aaPredicted RBP13.49□□□□□ -0.25
HNRNPC-205ENST00000553300 DNAAF2Q9NVR5 837 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-205ENST00000553300 MPP6Q9NZW5 540 aa13.49□□□□□ -0.25
HNRNPC-205ENST00000553300 EIF2B4Q9UI10 523 aaKnown RBP13.49□□□□□ -0.25
HNRNPC-205ENST00000553300 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
HNRNPC-205ENST00000553300 KNL1Q8NG31 2342 aa13.49□□□□□ -0.25
HNRNPC-205ENST00000553300 LRRC53A6NM62 1247 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 GOLGA6L19H0YKK7 550 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 MID1O15344 667 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 RNASEH2AO75792 299 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 CD27P26842 260 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 PRKCIP41743 596 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 ZNF143P52747 638 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 CCDC15Q0P6D6 951 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 TEAD4Q15561 434 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 ASIC2Q16515 512 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 SFMBT2Q5VUG0 894 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 RETSATQ6NUM9 610 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 DCUN1D2Q6PH85 259 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 TFAP2DQ7Z6R9 452 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 ZCCHC9Q8N567 271 aaKnown RBP13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 MINDY1Q8N5J2 469 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 OR2T34Q8NGX1 318 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 C1orf216Q8TAB5 229 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 IQCDQ96DY2 449 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 NAP1L5Q96NT1 182 aaPredicted RBP13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 SYT11Q9BT88 431 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 NEUROG2Q9H2A3 272 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 CBX8Q9HC52 389 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 TMPRSS4Q9NRS4 437 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 VPS51Q9UID3 782 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 PCDH15Q96QU1 1955 aa13.48□□□□□ -0.25
HNRNPC-205ENST00000553300 A0A1W2PP55 124 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 TCRBV5S1A1TA0A578 114 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 C1QTNF3-AMACRE9PGA6 284 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SLC7A4O43246 635 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 FSBPO95073 299 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SRCP12931 536 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 RHOQP17081 205 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 PSMD8P48556 350 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 MAPKAPK2P49137 400 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 NOVA1P51513 510 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 GALCP54803 685 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 HDAC4P56524 1084 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SCAPQ12770 1279 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SEMA3BQ13214 749 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 HNRNPDQ14103 355 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SH3PXD2AQ5TCZ1 1133 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 KIAA0895LQ68EN5 471 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SLFN11Q7Z7L1 901 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 ATP11CQ8NB49 1132 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SNX19Q92543 992 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 BIRC7Q96CA5 298 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 PSMB7Q99436 277 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 CNPY3Q9BT09 278 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 TTYH3Q9C0H2 523 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 HAUS4Q9H6D7 363 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 PARVAQ9NVD7 372 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 ZNF212Q9UDV6 495 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 PPM1HQ9ULR3 514 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 SNX10Q9Y5X0 201 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 BZW2Q9Y6E2 419 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 ADAMTS9Q9P2N4 1935 aa13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 TPRP12270 2363 aaKnown RBP13.47□□□□□ -0.25
HNRNPC-205ENST00000553300 A0A0D9SEW6 157 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 CER1O95813 267 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 PLEKP08567 350 aaPredicted RBP13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 ZNF883P0CG24 379 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 L1CAMP32004 1257 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 GRIA4P48058 902 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 CCR5P51681 352 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 UBASH3AP57075 661 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 GEMIN4P57678 1058 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 FANCCQ00597 558 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 GNA12Q03113 381 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 GRIK2Q13002 908 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 EFHC2Q5JST6 749 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 PPP1R15BQ5SWA1 713 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 ARTNQ5T4W7 220 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 MANEALQ5VSG8 457 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 PSAPL1Q6NUJ1 521 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 RWDD4Q6NW29 188 aaKnown RBP13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 LUZP1Q86V48 1076 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 AADATQ8N5Z0 425 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 TMIEQ8NEW7 156 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 FAM131CQ96AQ9 280 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 SKA1Q96BD8 255 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 TBC1D31Q96DN5 1066 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 MCEEQ96PE7 176 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 CEP44Q9C0F1 390 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 MAGEH1Q9H213 219 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 ATP13A1Q9HD20 1204 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 TMEM248Q9NWD8 314 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 DONSONQ9NYP3 566 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 SERGEFQ9UGK8 458 aa13.46□□□□□ -0.25
HNRNPC-205ENST00000553300 NYNRINQ9P2P1 1898 aaKnown RBP13.46□□□□□ -0.26
HNRNPC-205ENST00000553300 A0A1W2PPC4 97 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 A0A1W2PQJ5 194 aa13.45□□□□□ -0.26
HNRNPC-205ENST00000553300 CBX4O00257 560 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 224.8 ms