RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ZMPSTE24O75844 475 aa15.08■□□□□ 0
DDX55-209ENST00000542286 ALDH1A2O94788 518 aa15.08■□□□□ 0
DDX55-209ENST00000542286 NMBRP28336 390 aa15.08■□□□□ 0
DDX55-209ENST00000542286 ZNF460Q14592 562 aa15.08■□□□□ 0
DDX55-209ENST00000542286 PAFAH1B3Q15102 231 aaKnown RBP15.08■□□□□ 0
DDX55-209ENST00000542286 SPDYAQ5MJ70 313 aa15.08■□□□□ 0
DDX55-209ENST00000542286 STEAP4Q687X5 459 aa15.08■□□□□ 0
DDX55-209ENST00000542286 MBLAC2Q68D91 279 aa15.08■□□□□ 0
DDX55-209ENST00000542286 ARCQ7LC44 396 aa15.08■□□□□ 0
DDX55-209ENST00000542286 SDCCAG8Q86SQ7 713 aaPredicted RBP15.08■□□□□ 0
DDX55-209ENST00000542286 CRLF3Q8IUI8 442 aa15.08■□□□□ 0
DDX55-209ENST00000542286 VANGL2Q9ULK5 521 aa15.08■□□□□ 0
DDX55-209ENST00000542286 TSC2P49815 1807 aa15.08■□□□□ 0
DDX55-209ENST00000542286 HACD1B0YJ81 288 aa15.07■□□□□ 0
DDX55-209ENST00000542286 ZNF487B1APH4 448 aa15.07■□□□□ 0
DDX55-209ENST00000542286 PLIN3O60664 434 aa15.07■□□□□ 0
DDX55-209ENST00000542286 CNPY1Q3B7I2 92 aa15.07■□□□□ 0
DDX55-209ENST00000542286 NOMO2Q5JPE7 1267 aa15.07■□□□□ 0
DDX55-209ENST00000542286 TEDDM1Q5T9Z0 273 aa15.07■□□□□ 0
DDX55-209ENST00000542286 MARK2Q7KZI7 788 aaKnown RBP15.07■□□□□ 0
DDX55-209ENST00000542286 RBM15BQ8NDT2 890 aaKnown RBP15.07■□□□□ 0
DDX55-209ENST00000542286 GPR152Q8TDT2 470 aa15.07■□□□□ 0
DDX55-209ENST00000542286 KCTD13Q8WZ19 329 aa15.07■□□□□ 0
DDX55-209ENST00000542286 MCUR1Q96AQ8 359 aa15.07■□□□□ 0
DDX55-209ENST00000542286 SNX15Q9NRS6 342 aa15.07■□□□□ 0
DDX55-209ENST00000542286 TXNDC16Q9P2K2 825 aa15.07■□□□□ 0
DDX55-209ENST00000542286 GABRQQ9UN88 632 aa15.07■□□□□ 0
DDX55-209ENST00000542286 HNRNPCL1O60812 293 aaKnown RBP15.07■□□□□ 0
DDX55-209ENST00000542286 SNNO75324 88 aaPredicted RBP15.07■□□□□ 0
DDX55-209ENST00000542286 SCNN1AP37088 669 aa15.07■□□□□ 0
DDX55-209ENST00000542286 GLRBP48167 497 aa15.07■□□□□ 0
DDX55-209ENST00000542286 CAP1Q01518 475 aa15.07■□□□□ 0
DDX55-209ENST00000542286 SEMA3BQ13214 749 aa15.07■□□□□ 0
DDX55-209ENST00000542286 NAPRTQ6XQN6 538 aa15.07■□□□□ 0
DDX55-209ENST00000542286 KBTBD2Q8IY47 623 aa15.07■□□□□ 0
DDX55-209ENST00000542286 CNTD1Q8N815 330 aa15.07■□□□□ 0
DDX55-209ENST00000542286 ZNF398Q8TD17 642 aa15.07■□□□□ 0
DDX55-209ENST00000542286 STMN2Q93045 179 aa15.07■□□□□ 0
DDX55-209ENST00000542286 ZNF184Q99676 751 aaPredicted RBP15.07■□□□□ 0
DDX55-209ENST00000542286 IARS2Q9NSE4 1012 aaKnown RBP15.07■□□□□ 0
DDX55-209ENST00000542286 STX18Q9P2W9 335 aaKnown RBP15.07■□□□□ 0
DDX55-209ENST00000542286 TTC24A2A3L6 582 aaPredicted RBP15.07■□□□□ 0
DDX55-209ENST00000542286 M0QZ92 97 aa15.07■□□□□ 0
DDX55-209ENST00000542286 TGDSO95455 350 aa15.07■□□□□ 0
DDX55-209ENST00000542286 POLBP06746 335 aa15.07■□□□□ 0
DDX55-209ENST00000542286 SLC1A6P48664 564 aa15.07■□□□□ 0
DDX55-209ENST00000542286 ITGA7Q13683 1181 aa15.07■□□□□ 0
DDX55-209ENST00000542286 ATG16L1Q676U5 607 aa15.07■□□□□ 0
DDX55-209ENST00000542286 FSTL4Q6MZW2 842 aa15.07■□□□□ 0
DDX55-209ENST00000542286 CDKL2Q92772 493 aa15.07■□□□□ 0
DDX55-209ENST00000542286 FAM161BQ96MY7 647 aa15.07■□□□□ 0
DDX55-209ENST00000542286 C7orf26Q96N11 449 aa15.07■□□□□ 0
DDX55-209ENST00000542286 VCX3BQ9H321 246 aa15.07■□□□□ 0
DDX55-209ENST00000542286 VCX3AQ9NNX9 186 aa15.07■□□□□ 0
DDX55-209ENST00000542286 NMRK2Q9NPI5 230 aa15.07■□□□□ 0
DDX55-209ENST00000542286 MPP6Q9NZW5 540 aa15.07■□□□□ 0
DDX55-209ENST00000542286 PADI3Q9ULW8 664 aa15.07■□□□□ 0
DDX55-209ENST00000542286 ZCWPW2A0A1B0GU75 182 aa15.06■□□□□ 0
DDX55-209ENST00000542286 ARHGAP42A6NI28 874 aa15.06■□□□□ 0
DDX55-209ENST00000542286 PHGDHO43175 533 aaKnown RBP15.06■□□□□ 0
DDX55-209ENST00000542286 LYNP07948 512 aa15.06■□□□□ 0
DDX55-209ENST00000542286 UPP1Q16831 310 aa15.06■□□□□ 0
DDX55-209ENST00000542286 PSTKQ8IV42 348 aaKnown RBP15.06■□□□□ 0
DDX55-209ENST00000542286 MTBPQ96DY7 904 aa15.06■□□□□ 0
DDX55-209ENST00000542286 SPATA16Q9BXB7 569 aa15.06■□□□□ 0
DDX55-209ENST00000542286 C20orf96Q9NUD7 363 aaPredicted RBP15.06■□□□□ 0
DDX55-209ENST00000542286 WASF2Q9Y6W5 498 aa15.06■□□□□ 0
DDX55-209ENST00000542286 KLF11O14901 512 aa15.06■□□□□ 0
DDX55-209ENST00000542286 CRHR2Q13324 411 aa15.06■□□□□ 0
DDX55-209ENST00000542286 POU6F1Q14863 301 aa15.06■□□□□ 0
DDX55-209ENST00000542286 ZNF280DQ6N043 979 aa15.06■□□□□ 0
DDX55-209ENST00000542286 ARHGAP18Q8N392 663 aa15.06■□□□□ 0
DDX55-209ENST00000542286 DQX1Q8TE96 717 aaKnown RBP15.06■□□□□ 0
DDX55-209ENST00000542286 TRMT13Q9NUP7 481 aaKnown RBP15.06■□□□□ 0
DDX55-209ENST00000542286 PACSIN3Q9UKS6 424 aa15.06■□□□□ 0
DDX55-209ENST00000542286 TRPV2Q9Y5S1 764 aa15.06■□□□□ 0
DDX55-209ENST00000542286 GARSP41250 739 aaKnown RBP15.05■□□□□ 0
DDX55-209ENST00000542286 GPR15P49685 360 aa15.05■□□□□ 0
DDX55-209ENST00000542286 SERPINB9P50453 376 aa15.05■□□□□ 0
DDX55-209ENST00000542286 SLC25A3Q00325 362 aa15.05■□□□□ 0
DDX55-209ENST00000542286 THOC5Q13769 683 aaKnown RBP15.05■□□□□ 0
DDX55-209ENST00000542286 GSTA3Q16772 222 aa15.05■□□□□ 0
DDX55-209ENST00000542286 ANKRD20A4Q4UJ75 823 aa15.05■□□□□ 0
DDX55-209ENST00000542286 PABPC1LQ4VXU2 614 aaKnown RBP15.05■□□□□ 0
DDX55-209ENST00000542286 C17orf99Q6UX52 265 aa15.05■□□□□ 0
DDX55-209ENST00000542286 TRIB2Q92519 343 aa15.05■□□□□ 0
DDX55-209ENST00000542286 SORT1Q99523 831 aa15.05■□□□□ 0
DDX55-209ENST00000542286 APBA2Q99767 749 aa15.05■□□□□ 0
DDX55-209ENST00000542286 SENP6Q9GZR1 1112 aaPredicted RBP15.05■□□□□ 0
DDX55-209ENST00000542286 RCOR3Q9P2K3 495 aaPredicted RBP15.05■□□□□ 0
DDX55-209ENST00000542286 LOC100653049A0A140TA62 436 aa15.05■□□□□ -0
DDX55-209ENST00000542286 CAPN14A8MX76 684 aa15.05■□□□□ -0
DDX55-209ENST00000542286 PDLIM1O00151 329 aa15.05■□□□□ -0
DDX55-209ENST00000542286 KRT34O76011 436 aa15.05■□□□□ -0
DDX55-209ENST00000542286 AP2A1O95782 977 aa15.05■□□□□ -0
DDX55-209ENST00000542286 PROCP04070 461 aa15.05■□□□□ -0
DDX55-209ENST00000542286 PGM1P36871 562 aa15.05■□□□□ -0
DDX55-209ENST00000542286 RGS2P41220 211 aa15.05■□□□□ -0
DDX55-209ENST00000542286 CD300LGQ6UXG3 332 aa15.05■□□□□ -0
DDX55-209ENST00000542286 RASAL3Q86YV0 1011 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 268.4 ms