RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 GRIN3AQ8TCU5 1115 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 ISL2Q96A47 359 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 ZNF512Q96ME7 567 aaPredicted RBP11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 WDR41Q9HAD4 459 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 EIF2B3Q9NR50 452 aaKnown RBP11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 OXSMQ9NWU1 459 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 RHBDL2Q9NX52 303 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 GJD2Q9UKL4 321 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 KIAA1257Q9ULG3 409 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 AKT3Q9Y243 479 aa11.96□□□□□ -0.49
PDZRN3-203ENST00000462146 SCN4AP35499 1836 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 TANC1Q9C0D5 1861 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 TMEM114B3SHH9 223 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 TMCC1O94876 653 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 TNFAIP8O95379 198 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 DESP17661 470 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 LMO2P25791 158 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC5A2P31639 672 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 SULT1E1P49888 294 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 HPCAP84074 193 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 IFRD2Q12894 506 aaPredicted RBP11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF460Q14592 562 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 CYTH1Q15438 398 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF618Q5T7W0 954 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 OTUD1Q5VV17 481 aaPredicted RBP11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 SEL1L3Q68CR1 1132 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 LBX2Q6XYB7 198 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC26A9Q7LBE3 791 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 PLPPR4Q7Z2D5 763 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 DEFB106AQ8N104 65 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 SPATA6LQ8N4H0 392 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 TMEM151AQ8N4L1 468 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 ATP6V1E2Q96A05 226 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 C18orf25Q96B23 403 aaPredicted RBP11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 SERPINI1Q99574 410 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 ACE2Q9BYF1 805 aaPredicted RBP11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 ILKAPQ9H0C8 392 aaPredicted RBP11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 TASP1Q9H6P5 420 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 PDGFCQ9NRA1 345 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 CHRAC1Q9NRG0 131 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 IARS2Q9NSE4 1012 aaKnown RBP11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 NDUFA13Q9P0J0 144 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 GTF2IRD1Q9UHL9 959 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 SLC39A10Q9ULF5 831 aa11.96□□□□□ -0.5
PDZRN3-203ENST00000462146 PRSS51A0A1B0GVH4 220 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 HACD1B0YJ81 288 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM200BP0CF97 657 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 TGFB3P10600 412 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 PPARGP37231 505 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 NAGLUP54802 743 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 TNFAIP2Q03169 654 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 GRM3Q14832 879 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 IL23RQ5VWK5 629 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 AHI1Q8N157 1196 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 TMEM102Q8N9M5 508 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 DNAAF3Q8N9W5 541 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 RNF139Q8WU17 664 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 TMIGD2Q96BF3 282 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM149B1Q96BN6 582 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 CNDP1Q96KN2 507 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 Q9H521 79 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF385DQ9H6B1 395 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 SUDS3Q9H7L9 328 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 ZNF696Q9H7X3 374 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 LIN28AQ9H9Z2 209 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 UBP1Q9NZI7 540 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 KLHL8Q9P2G9 620 aaPredicted RBP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 VANGL2Q9ULK5 521 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 KPNA7A9QM74 516 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 HDAC3O15379 428 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 CSPG5O95196 566 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM58BPP0C7Q3 252 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 CDK4P11802 303 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 RPL14P50914 215 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 RABGGTBP53611 331 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 NSUN2Q08J23 767 aaKnown RBP eCLIP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 METTL21CQ5VZV1 264 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 LSMEM2Q8N112 164 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 SNX31Q8N9S9 440 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 RP9Q8TA86 221 aaKnown RBP11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 KLRG1Q96E93 195 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 VPS39Q96JC1 886 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 PCDHAC1Q9H158 963 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 RAP2CQ9Y3L5 183 aa11.95□□□□□ -0.5
PDZRN3-203ENST00000462146 C7orf72A4D263 438 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM72CH0Y354 149 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 VAPBO95292 243 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 INSRRP14616 1297 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 TFEBP19484 476 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 GLUD2P49448 558 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM72AQ5TYM5 149 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM72DQ6L9T8 149 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 GK5Q6ZS86 529 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 KCNMB4Q86W47 210 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 FAM72BQ86X60 149 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 PGAM4Q8N0Y7 254 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 PCDH20Q8N6Y1 951 aaKnown RBP11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 KCTD4Q8WVF5 259 aa11.94□□□□□ -0.5
PDZRN3-203ENST00000462146 NAT9Q9BTE0 207 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms