RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 PRRX2Q99811 253 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ZSCAN5AQ9BUG6 496 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 AP5M1Q9H0R1 490 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ISCUQ9H1K1 167 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ERVMER34-1Q9H9K5 563 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 MCCC2Q9HCC0 563 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 TCF7L1Q9HCS4 588 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 TREM1Q9NP99 234 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 PANK4Q9NVE7 773 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 TRNAU1APQ9NX07 287 aaKnown RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 SYBUQ9NX95 663 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 TSPYL4Q9UJ04 414 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 PADI4Q9UM07 663 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 GMPPBQ9Y5P6 360 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 DLC1Q96QB1 1528 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 MTMR11A4FU01 709 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CFAP73A6NFT4 308 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 NDUFS8O00217 210 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 RGS13O14921 159 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 PTP4A3O75365 173 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 SEC22BO75396 215 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 PRDM1O75626 825 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 POMCP01189 267 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 GHRP10912 638 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 BMP2P12643 396 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 C6P13671 934 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 HK1P19367 917 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CXCR2P25025 360 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 MAP4P27816 1152 aaKnown RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 IL13P35225 146 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 IL15P40933 162 aaPredicted RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 GSTM5P46439 218 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 AFF3P51826 1226 aaKnown RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 STK4Q13043 487 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ADAM15Q13444 863 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CAMK2DQ13557 499 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 GIT2Q14161 759 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 LIN52Q52LA3 116 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 C1orf141Q5JVX7 400 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 IFIT1BQ5T764 474 aaKnown RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ATAD3BQ5T9A4 648 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ARHGEF16Q5VV41 709 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 KRT79Q5XKE5 535 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ARMC6Q6NXE6 501 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 MSANTD1Q6ZTZ1 278 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 STOX1Q6ZVD7 989 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 BRINP3Q76B58 766 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 SLITRK4Q8IW52 837 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 DENND6AQ8IWF6 608 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 PPM1KQ8N3J5 372 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 OXR1Q8N573 874 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 KDF1Q8NAX2 398 aaPredicted RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 FAM156AQ8NDB6 213 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ICA1LQ8NDH6 482 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 HIPK4Q8NE63 616 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 MCPH1Q8NEM0 835 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 GPR152Q8TDT2 470 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ASB12Q8WXK4 309 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 TAMM41Q96BW9 452 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ATG4CQ96DT6 458 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ZIM3Q96PE6 472 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 FCRL4Q96PJ5 515 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CDC6Q99741 560 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CDADC1Q9BWV3 514 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 GPR62Q9BZJ7 368 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 HOXD1Q9GZZ0 328 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 MTFR1LQ9H019 292 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CLPBQ9H078 707 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 KLHL25Q9H0H3 589 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 DPH5Q9H2P9 285 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 ZC4H2Q9NQZ6 224 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 NINJ2Q9NZG7 142 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CTTNBP2NLQ9P2B4 639 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 PSMC3IPQ9P2W1 217 aaPredicted RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 PCDHGB4Q9UN71 923 aa5.07□□□□□ -1.6
EPHA3-202ENST00000452448 CPSF1Q10570 1443 aaKnown RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 YTHDC2Q9H6S0 1430 aaKnown RBP5.07□□□□□ -1.6
EPHA3-202ENST00000452448 A0A1W2PPL8 197 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 OR5K3A6NET4 321 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 LAD1O00515 517 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 GIPC1O14908 333 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PLD2O14939 933 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 KIAA0391O15091 583 aaKnown RBP5.06□□□□□ -1.6
EPHA3-202ENST00000452448 SCAMP1O15126 338 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 AP1G1O43747 822 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PGLSO95336 258 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PRAMEF12O95522 483 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PLATP00750 562 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PRR35P0CG20 571 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 KRT3P12035 628 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 TCP1P17987 556 aaKnown RBP5.06□□□□□ -1.6
EPHA3-202ENST00000452448 CMA1P23946 247 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PCGF2P35227 344 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 STX17P56962 302 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PTPN11Q06124 597 aaPredicted RBP5.06□□□□□ -1.6
EPHA3-202ENST00000452448 DSC1Q08554 894 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 PMS2P3Q13401 168 aa5.06□□□□□ -1.6
EPHA3-202ENST00000452448 ZNF268Q14587 947 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms