RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 IL12RB2Q99665 862 aa22.56■■□□□ 1.2
VSX1-205ENST00000429762 SP110Q9HB58 689 aa22.56■■□□□ 1.2
VSX1-205ENST00000429762 MAD1L1Q9Y6D9 718 aa22.56■■□□□ 1.2
VSX1-205ENST00000429762 EXOC1LA0A1B0GW35 172 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 POC1B-GALNT4F8VUJ3 575 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 H3BNC9 293 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 PEX11BO96011 259 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 RB1P06400 928 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 MAGEA3P43357 314 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 ATP1A2P50993 1020 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 NTHL1P78549 312 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 ZNF33AQ06730 810 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 RABGAP1LQ5R372 815 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 ADGRF1Q5T601 910 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 TIGD7Q6NT04 549 aaPredicted RBP22.55■■□□□ 1.2
VSX1-205ENST00000429762 OR7D4Q8NG98 312 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 PABPC5Q96DU9 382 aaKnown RBP22.55■■□□□ 1.2
VSX1-205ENST00000429762 ABHD8Q96I13 439 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 GCNAQ96QF7 691 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 VAT1Q99536 393 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 EIF2B3Q9NR50 452 aaKnown RBP22.55■■□□□ 1.2
VSX1-205ENST00000429762 TBK1Q9UHD2 729 aa22.55■■□□□ 1.2
VSX1-205ENST00000429762 LAMA3Q16787 3333 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 A0A0D9SEW6 157 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 GREM1O60565 184 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 CPP00450 1065 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 MGAT1P26572 445 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 GCAP28676 217 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 MAPKAPK2P49137 400 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 MTA1Q13330 715 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 OR52K1Q8NGK4 314 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 SHKBP1Q8TBC3 707 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 BHMTQ93088 406 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 SIGLEC10Q96LC7 697 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 SLC46A2Q9BY10 475 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 PLAC1Q9HBJ0 212 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 DNMT3BQ9UBC3 853 aaKnown RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 ADAM21Q9UKJ8 722 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 ACTL7AQ9Y615 435 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 ATG2AQ2TAZ0 1938 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 CDH23Q9H251 3354 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 ZNF189O75820 626 aaPredicted RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 CDC25CP30307 473 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 ETFBP38117 255 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 STAT4Q14765 748 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 C6orf118Q5T5N4 469 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 ACBD5Q5T8D3 534 aaPredicted RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 CYP4X1Q8N118 509 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 AZIN2Q96A70 460 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 FRMD8Q9BZ67 464 aaPredicted RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 ROPN1BQ9BZX4 212 aaPredicted RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 ROPN1Q9HAT0 212 aaPredicted RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 GLOD4Q9HC38 313 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 XAB2Q9HCS7 855 aaKnown RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 CFAP97Q9P2B7 532 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 ZC3H7BQ9UGR2 993 aaKnown RBP22.54■■□□□ 1.2
VSX1-205ENST00000429762 RABGEF1Q9UJ41 708 aa22.54■■□□□ 1.2
VSX1-205ENST00000429762 CEP290O15078 2479 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.53■■□□□ 1.2
VSX1-205ENST00000429762 TTC24A2A3L6 582 aaPredicted RBP22.53■■□□□ 1.2
VSX1-205ENST00000429762 NEBLO76041 1014 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 AP2A1O95782 977 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 MT-CYBP00156 380 aaPredicted RBP22.53■■□□□ 1.2
VSX1-205ENST00000429762 MAXP61244 160 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 ERVK-21P61565 698 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 SLC10A7Q0GE19 358 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 SERINC3Q13530 473 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 LRRC8BQ6P9F7 803 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 MAML1Q92585 1016 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 TLCD1Q96CP7 247 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 NKX2-4Q9H2Z4 354 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 NT5MQ9NPB1 228 aa22.53■■□□□ 1.2
VSX1-205ENST00000429762 TRAV19A0A0A6YYK7 116 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 NR1D1P20393 614 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 CDH4P55283 916 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 SARNPP82979 210 aaKnown RBP22.52■■□□□ 1.2
VSX1-205ENST00000429762 TEAD2Q15562 447 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 SLC5A9Q2M3M2 681 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 GPR158Q5T848 1215 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 KCTD11Q693B1 232 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 PCDHA11Q9Y5I1 949 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 MOSPD3O75425 235 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 GLDCP23378 1020 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 PHBP35232 272 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 CDK16Q00536 496 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 PARP15Q460N3 678 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 CASC4Q6P4E1 433 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 Q6ZNB5 142 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 PRPF39Q86UA1 669 aaKnown RBP22.52■■□□□ 1.2
VSX1-205ENST00000429762 GDPD5Q8WTR4 605 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 ARHGEF2Q92974 986 aaKnown RBP22.52■■□□□ 1.2
VSX1-205ENST00000429762 PGM2Q96G03 612 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 XPO6Q96QU8 1125 aaKnown RBP22.52■■□□□ 1.2
VSX1-205ENST00000429762 CCDC77Q9BR77 488 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 SPON2Q9BUD6 331 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 PBX4Q9BYU1 374 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 SYBUQ9NX95 663 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 DONSONQ9NYP3 566 aa22.52■■□□□ 1.2
VSX1-205ENST00000429762 TBL1XO60907 577 aa22.51■■□□□ 1.19
VSX1-205ENST00000429762 RHOP08100 348 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms