RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 CFAP43Q8NDM7 1665 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 A0A096LPK6 155 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 LYNP07948 512 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHANK3-202ENST00000414786 DEF8Q6ZN54 512 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 EEF1AKMT1Q8WVE0 214 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 TBL1YQ9BQ87 522 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 DNMT3LQ9UJW3 386 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 A0A0A6YYK5 440 aaPredicted RBP18.75■□□□□ 0.59
SHANK3-202ENST00000414786 BNC1Q01954 994 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 POLE3Q9NRF9 147 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 AGPAT3Q9NRZ7 376 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 PLXNC1O60486 1568 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 YBX3P16989 372 aaKnown RBP eCLIP18.75■□□□□ 0.59
SHANK3-202ENST00000414786 SCNN1GP51170 649 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 BCAP31P51572 246 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 OPTCQ9UBM4 332 aa18.75■□□□□ 0.59
SHANK3-202ENST00000414786 UBA2Q9UBT2 640 aaPredicted RBP18.75■□□□□ 0.59
SHANK3-202ENST00000414786 DMGDHQ9UI17 866 aaKnown RBP18.75■□□□□ 0.59
SHANK3-202ENST00000414786 PLOD3O60568 738 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF432O94892 652 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 NCK1P16333 377 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 WARSP23381 471 aaKnown RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 NT5C2P49902 561 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 BOLA3Q53S33 107 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 USP49Q70CQ1 688 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 ZNF280BQ86YH2 543 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 HOXA7P31268 230 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 KCTD19Q17RG1 926 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 LMLNQ96KR4 655 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 BRINP2Q9C0B6 783 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 CRISPLD1Q9H336 500 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 TSPAN16Q9UKR8 245 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 NEDD8-MDP1E9PL57 170 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 STARP49675 285 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 C15orf59Q2T9L4 293 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 BRD9Q9H8M2 597 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 ZMYND8Q9ULU4 1186 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 TAF4O00268 1085 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 TRIM66O15016 1216 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 CTSOP43234 321 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 SKP1P63208 163 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 CXCL17Q6UXB2 119 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 GHDCQ8N2G8 530 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 MAB21L3Q8N8X9 362 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 NSMCE2Q96MF7 247 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 RACGAP1Q9H0H5 632 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 EIF2S3P41091 472 aaKnown RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 NPTX2P47972 431 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 CCDC126Q96EE4 140 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 NDNQ99608 321 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 ASB8Q9H765 288 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 PLK2Q9NYY3 685 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 PTPRTO14522 1441 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 TRIM64BA6NI03 449 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 CCNYL3P0C7X3 344 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 PDX1P52945 283 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 ATXN1P54253 815 aaKnown RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 KCNMA1Q12791 1236 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 PDIA5Q14554 519 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 PFKFB4Q16877 469 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 MINDY4Q4G0A6 757 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 N4BP2L1Q5TBK1 243 aaPredicted RBP18.74■□□□□ 0.59
SHANK3-202ENST00000414786 SIRT2Q8IXJ6 389 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 CEP44Q9C0F1 390 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 NDUFAF1Q9Y375 327 aa18.74■□□□□ 0.59
SHANK3-202ENST00000414786 UGGT1Q9NYU2 1555 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 GALNT3Q14435 633 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 RASA2Q15283 850 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 NRF1Q16656 503 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 KLHDC7AQ5VTJ3 777 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 SLC2A14Q8TDB8 520 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 PAFAH2Q99487 392 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 LGMNQ99538 433 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 TMPRSS4Q9NRS4 437 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 CLIC5Q9NZA1 410 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 PACSIN3Q9UKS6 424 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 S100A3P33764 101 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 PPATQ06203 517 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 FSCN1Q16658 493 aaKnown RBP18.73■□□□□ 0.59
SHANK3-202ENST00000414786 SELENOMQ8WWX9 145 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 DRG1Q9Y295 367 aaKnown RBP18.73■□□□□ 0.59
SHANK3-202ENST00000414786 SMAPO00193 183 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 NQO1P15559 274 aaKnown RBP18.73■□□□□ 0.59
SHANK3-202ENST00000414786 TMEM199Q8N511 208 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 DEFB119Q8N690 84 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 VANGL1Q8TAA9 524 aaPredicted RBP18.73■□□□□ 0.59
SHANK3-202ENST00000414786 FAR1Q8WVX9 515 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 TTLL2Q9BWV7 592 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 EPB41L4AQ9HCS5 686 aaPredicted RBP18.73■□□□□ 0.59
SHANK3-202ENST00000414786 SERPINA3P01011 423 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 IFNGR2P38484 337 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 CD86P42081 329 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 BST2Q10589 180 aaKnown RBP18.73■□□□□ 0.59
SHANK3-202ENST00000414786 HELQQ8TDG4 1101 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 CDCA5Q96FF9 252 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 ARHGAP9Q9BRR9 750 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 DSN1Q9H410 356 aa18.73■□□□□ 0.59
SHANK3-202ENST00000414786 ZBTB11O95625 1053 aaPredicted RBP18.73■□□□□ 0.59
SHANK3-202ENST00000414786 HDCP19113 662 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms