RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 FAM46CQ5VWP2 391 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 RETSATQ6NUM9 610 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 ZNF571Q7Z3V5 609 aaPredicted RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 DRC7Q8IY82 874 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 SH2D3CQ8N5H7 860 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 NTAN1Q96AB6 310 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 TRIM11Q96F44 468 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 CNPY3Q9BT09 278 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.49□□□□□ -0.57
RFFL-204ENST00000414419 TTYH3Q9C0H2 523 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 RAB6CQ9H0N0 254 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 RETREG1Q9H6L5 497 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 ATP13A1Q9HD20 1204 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 TAS2R14Q9NYV8 317 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 EIF2B4Q9UI10 523 aaKnown RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 LUC7L2Q9Y383 392 aaKnown RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 OR51B4Q9Y5P0 310 aa11.49□□□□□ -0.57
RFFL-204ENST00000414419 BZW2Q9Y6E2 419 aaKnown RBP11.49□□□□□ -0.57
RFFL-204ENST00000414419 CHD5Q8TDI0 1954 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 A0A0D9SEW6 157 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 A0A1B0GTW7 788 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 A0A1W2PP55 124 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 TCRBV5S1A1TA0A578 114 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 LRRC72A6NJI9 287 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 C1QTNF3-AMACRE9PGA6 284 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 CBX4O00257 560 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 ARHGAP33O14559 1287 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 CBFA2T2O43439 604 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 ATP9BO43861 1147 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 SNAP91O60641 907 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 RTN2O75298 545 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 RNF8O76064 485 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 FSBPO95073 299 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 C7P10643 843 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 RHOQP17081 205 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 PSMA2P25787 234 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 RECQLP46063 649 aaPredicted RBP11.48□□□□□ -0.57
RFFL-204ENST00000414419 AIF1P55008 147 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 ZBED6P86452 979 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 NRG1Q02297 640 aaPredicted RBP11.48□□□□□ -0.57
RFFL-204ENST00000414419 GNA12Q03113 381 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 TMC6Q7Z403 805 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 HDDC3Q8N4P3 179 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 ZCCHC9Q8N567 271 aaKnown RBP11.48□□□□□ -0.57
RFFL-204ENST00000414419 CCDC185Q8N715 623 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 DCAF4L2Q8NA75 395 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 FRS2Q8WU20 508 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 DNASE2BQ8WZ79 361 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 SYN2Q92777 582 aaPredicted RBP11.48□□□□□ -0.57
RFFL-204ENST00000414419 TBC1D31Q96DN5 1066 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 FAM129BQ96TA1 746 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 SYT11Q9BT88 431 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 TSPY26PQ9H489 355 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 C6orf106Q9H6K1 298 aaPredicted RBP11.48□□□□□ -0.57
RFFL-204ENST00000414419 DNAI1Q9UI46 699 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 VPS51Q9UID3 782 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 FZD4Q9ULV1 537 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 HPCAL4Q9UM19 191 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 HS3ST2Q9Y278 367 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.48□□□□□ -0.57
RFFL-204ENST00000414419 SCINQ9Y6U3 715 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 KNL1Q8NG31 2342 aa11.48□□□□□ -0.57
RFFL-204ENST00000414419 DDX3XO00571 662 aaKnown RBP eCLIP11.47□□□□□ -0.571e-14■■■□□ 16.5
RFFL-204ENST00000414419 CDX4O14627 284 aaPredicted RBP11.47□□□□□ -0.57
RFFL-204ENST00000414419 MCF2LO15068 1137 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 ALOX15BO15296 676 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 BCAT2O15382 392 aaPredicted RBP11.47□□□□□ -0.57
RFFL-204ENST00000414419 ATMINO43313 823 aaPredicted RBP11.47□□□□□ -0.57
RFFL-204ENST00000414419 CREB3O43889 395 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 OPHN1O60890 802 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 LRIG2O94898 1065 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 SERPING1P05155 500 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 MYBL1P10243 752 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 SRCP12931 536 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 VAV1P15498 845 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 GOT1P17174 413 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 L1CAMP32004 1257 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 PBX1P40424 430 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 MAPKAPK2P49137 400 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 CLCN6P51797 869 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 SLC20A2Q08357 652 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 SCAPQ12770 1279 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 MAMLD1Q13495 774 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 NFKBIBQ15653 356 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 PPM1JQ5JR12 505 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 E4F1Q66K89 784 aaPredicted RBP11.47□□□□□ -0.57
RFFL-204ENST00000414419 PLEKHA7Q6IQ23 1121 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 LINGO4Q6UY18 593 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 Q6ZVU0 165 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 ZNF354CQ86Y25 554 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 OR7D4Q8NG98 312 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 OR14C36Q8NHC7 312 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 ZNF653Q96CK0 615 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 PSMB7Q99436 277 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 EPAS1Q99814 870 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 NEUROG2Q9H2A3 272 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 CAPN10Q9HC96 672 aa11.47□□□□□ -0.57
RFFL-204ENST00000414419 MRPL47Q9HD33 250 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms