RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 LRRC23Q53EV4 343 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CMPK2Q5EBM0 449 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 BEND6Q5SZJ8 279 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF468Q5VIY5 522 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SNX30Q5VWJ9 437 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 EEF1DP3Q658K8 133 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 E4F1Q66K89 784 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TWF2Q6IBS0 349 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CAPRIN2Q6IMN6 1127 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 ALKBH5Q6P6C2 394 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SLC22A25Q6T423 547 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 C8orf86Q6ZUL3 223 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 C1orf186Q6ZWK4 172 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CHSY3Q70JA7 882 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 DYMQ7RTS9 669 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GALNT7Q86SF2 657 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SYT9Q86SS6 491 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 OSTM1Q86WC4 334 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SLC44A2Q8IWA5 706 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 ADGRG2Q8IZP9 1017 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 ZNF619Q8N2I2 560 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SYT2Q8N9I0 419 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 USP38Q8NB14 1042 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PHOSPHO2Q8TCD6 241 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 KCNG4Q8TDN1 519 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GDPD5Q8WTR4 605 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GIMAP1Q8WWP7 306 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 MYLIPQ8WY64 445 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 LARP4BQ92615 738 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TOP1MTQ969P6 601 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PPP2R3CQ969Q6 453 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 DHX58Q96C10 678 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SPDL1Q96EA4 605 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 ASIC4Q96FT7 647 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 RAX2Q96IS3 184 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 BTBD6Q96KE9 485 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 MSLNLQ96KJ4 702 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 KREMEN1Q96MU8 473 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GUCD1Q96NT3 240 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 REEP2Q9BRK0 252 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 C17orf80Q9BSJ5 609 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 APOL6Q9BWW8 343 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 FTHL17Q9BXU8 183 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 EIF2AQ9BY44 585 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GPR63Q9BZJ6 419 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CD244Q9BZW8 370 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CCSER1Q9C0I3 900 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 NACA2Q9H009 215 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GOLPH3LQ9H4A5 285 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PRDM12Q9H4Q4 367 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 NRDE2Q9H7Z3 1164 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 RC3H2Q9HBD1 1191 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 EIF2B3Q9NR50 452 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TM7SF3Q9NS93 570 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 AGPAT5Q9NUQ2 364 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PIH1D1Q9NWS0 290 aaKnown RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 HPF1Q9NWY4 346 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TUBA8Q9NY65 449 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CLEC1BQ9P126 229 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 IGSF9Q9P2J2 1179 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 RABL2AQ9UBK7 228 aaPredicted RBP4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CPNE7Q9UBL6 633 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 CIDEBQ9UHD4 219 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 GTF3C4Q9UKN8 822 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 PCOLCE2Q9UKZ9 415 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TMED5Q9Y3A6 229 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 HES2Q9Y543 173 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 SQORQ9Y6N5 450 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 REV3LO60673 3130 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TRANK1O15050 2925 aa4.73□□□□□ -1.65
SF3B1-202ENST00000409915 TCHHQ07283 1943 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 A0A1B0GVL5 298 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 LINC01553A4QN01 128 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 HMX3A6NHT5 357 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 MYMKA6NI61 221 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 GTPBP1O00178 669 aaKnown RBP4.72□□□□□ -1.65
SF3B1-202ENST00000409915 BIN1O00499 593 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 ASAP2O43150 1006 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 MTSS1O43312 755 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 EIF4EBP3O60516 100 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-202ENST00000409915 ATP6V1G1O75348 118 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 FAM155BO75949 473 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 PRPF6O94906 941 aaKnown RBP4.72□□□□□ -1.65
SF3B1-202ENST00000409915 MLYCDO95822 493 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 GUCA1CO95843 209 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 CST3P01034 146 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-202ENST00000409915 CD3EP07766 207 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 LINC00271P0C7V0 271 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 CCDC192P0DO97 292 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 ACADMP11310 421 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 MYL4P12829 197 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 PFKFB1P16118 471 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 ARF4P18085 180 aaPredicted RBP4.72□□□□□ -1.65
SF3B1-202ENST00000409915 AOAHP28039 575 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 ADH6P28332 368 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 NTF4P34130 210 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 PBX3P40426 434 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 NAMPTP43490 491 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 ARL4DP49703 201 aa4.72□□□□□ -1.65
SF3B1-202ENST00000409915 CCT8P50990 548 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms