RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 ABHD10Q9NUJ1 306 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 ST3GAL5Q9UNP4 418 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 ITGB4P16144 1822 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 KIF13BQ9NQT8 1826 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 N4BP2Q86UW6 1770 aaPredicted RBP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 CCDC196A0A1B0GTZ2 297 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 SAC3D1A6NKF1 404 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 B8ZZF3 427 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 FOXN1O15353 648 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 TSPAN3O60637 253 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 DDNO94850 711 aaPredicted RBP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 HNRNPA1P09651 372 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 FAM163BP0C2L3 166 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 CHN1P15882 459 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 MAKP20794 623 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 CCT8P50990 548 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 TAP1Q03518 808 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 MTHFSDQ2M296 383 aaKnown RBP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 AARS2Q5JTZ9 985 aaKnown RBP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 PCID2Q5JVF3 399 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 C1orf141Q5JVX7 400 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 WDR78Q5VTH9 848 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 KIAA1324Q6UXG2 1013 aaKnown RBP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 ARRDC3Q96B67 414 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 MMS19Q96T76 1030 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF341Q9BYN7 854 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 MAP3K20Q9NYL2 800 aaKnown RBP6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 AFG3L2Q9Y4W6 797 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 ADAMTS7Q9UKP4 1686 aa6.19□□□□□ -1.42
RNU4-39P-201ENST00000362455 MYH14Q7Z406 1995 aaKnown RBP6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 COL4A3Q01955 1670 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 GRID2IPA4D2P6 1211 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 ORC4O43929 436 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 C1RP00736 705 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 HMOX1P09601 288 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 HSPA5P11021 654 aaKnown RBP6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 ACP5P13686 325 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 APEHP13798 732 aaKnown RBP6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 DUSP1P28562 367 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 PCP4P48539 62 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 COPB1P53618 953 aaKnown RBP6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 IGFL4Q6B9Z1 124 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 FAAH2Q6GMR7 532 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 ANO7Q6IWH7 933 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 PRR5LQ6MZQ0 368 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 FAM180BQ6P0A1 224 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 KYAT3Q6YP21 454 aaKnown RBP6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 LINC01465Q8N7H1 131 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 ANKRD44Q8N8A2 993 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 BEND2Q8NDZ0 799 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 STAMQ92783 540 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 CIPCQ9C0C6 399 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 JMJD4Q9H9V9 463 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 PDE11AQ9HCR9 933 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 FOXJ2Q9P0K8 574 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 FZD4Q9ULV1 537 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 COPG1Q9Y678 874 aaKnown RBP6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 PASKQ96RG2 1323 aa6.18□□□□□ -1.42
RNU4-39P-201ENST00000362455 WDR90Q96KV7 1748 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 ANKRD26Q9UPS8 1709 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 C3orf70A6NLC5 250 aaPredicted RBP6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 H0YIN7 160 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 NARSO43776 548 aaKnown RBP6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 KAT7O95251 611 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 ALDOAP04075 364 aaKnown RBP6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 ADRB1P08588 477 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 DRD4P21917 467 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 PNPLA4P41247 253 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 CYP4F2P78329 520 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 CFHR3Q02985 330 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 WDR45BQ5MNZ6 344 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 CBWD5Q5RIA9 395 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 SLC9C2Q5TAH2 1124 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 OLFM4Q6UX06 510 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 CLEC4GQ6UXB4 293 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 NAPRTQ6XQN6 538 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 C1orf122Q6ZSJ8 110 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 TSPYL6Q8N831 410 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 MAFAQ8NHW3 353 aaPredicted RBP6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 ST8SIA4Q92187 359 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 KAZALD1Q96I82 304 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 PDLIM2Q96JY6 352 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 MACROD1Q9BQ69 325 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 AGXT2Q9BYV1 514 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 CLPBQ9H078 707 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 HSF4Q9ULV5 492 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 TBX20Q9UMR3 447 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 ARHGAP26Q9UNA1 814 aa6.17□□□□□ -1.42
RNU4-39P-201ENST00000362455 CYP3A7-CYP3A51PA0A087WV96 503 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 B4E171 279 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 NPIPB8E9PQR5 432 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 GCOM1H8Y6P7 765 aaPredicted RBP6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 GRM8O00222 908 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 CAMTA2O94983 1202 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 ZNF202O95125 648 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 TBX18O95935 607 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 CYP3A7P24462 503 aa6.16□□□□□ -1.42
RNU4-39P-201ENST00000362455 TSPAN7P41732 249 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms