RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 AKR1B10O60218 316 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 PRPSAP2O60256 369 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 RNASEH1O60930 286 aaKnown RBP18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 LRCH4O75427 683 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 ZMPSTE24O75844 475 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 IGLV3-19P01714 112 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 DNTTP04053 509 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 SRCP12931 536 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 OXTRP30559 389 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 VASPP50552 380 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF75DP51815 510 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 ZBTB16Q05516 673 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 SPDYCQ5MJ68 293 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 PLA2G2CQ5R387 149 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 LYSMD4Q5XG99 296 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 TCEAL6Q6IPX3 200 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 Q6ZVU0 165 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 CYP4V2Q6ZWL3 525 aaPredicted RBP18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 CNGA4Q8IV77 575 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 ATP11CQ8NB49 1132 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 TCEAL3Q969E4 200 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 SNRNP25Q9BV90 132 aaKnown RBP18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 GPR174Q9BXC1 333 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 DHX35Q9H5Z1 703 aaKnown RBP18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 RETREG1Q9H6L5 497 aa18.39■□□□□ 0.53
SNRPA1-201ENST00000254193 BNIP3LO60238 219 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF806P0C7X5 589 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 TCF4P15884 667 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 ITPKAP23677 461 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 PSMD8P48556 350 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF33AQ06730 810 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 ERMARDQ5T6L9 678 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 IL31Q6EBC2 164 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 PRR23CQ6ZRP0 262 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 RTL3Q8N8U3 475 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 GANCQ8TET4 914 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 CCDC42Q96M95 316 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 HSPA12BQ96MM6 686 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 KCTD15Q96SI1 283 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 PABPC3Q9H361 631 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 NHEJ1Q9H9Q4 299 aaPredicted RBP18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 VPS45Q9NRW7 570 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 TMEM74BQ9NUR3 256 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 SPTLC3Q9NUV7 552 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 ANAPC7Q9UJX3 599 aa18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 ATXN2Q99700 1313 aaKnown RBP18.38■□□□□ 0.53
SNRPA1-201ENST00000254193 MUC22E2RYF6 1773 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 MID1O15344 667 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 RAMP2O60895 175 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 IL1R2P27930 398 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 SLC8A1P32418 973 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 ACSL1P33121 698 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 PCK1P35558 622 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 TPI1P60174 286 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 ARF5P84085 180 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 PIGHQ14442 188 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 ELAVL3Q14576 367 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 CST6Q15828 149 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 TTC31Q49AM3 519 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 RETSATQ6NUM9 610 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 ARHGEF2Q92974 986 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF419Q96HQ0 510 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 ACE2Q9BYF1 805 aaPredicted RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 MAGEH1Q9H213 219 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 NOL6Q9H6R4 1146 aaKnown RBP18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 FBXL12Q9NXK8 326 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 CTTNBP2NLQ9P2B4 639 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 SERGEFQ9UGK8 458 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 IP6K2Q9UHH9 426 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 ACTL7AQ9Y615 435 aa18.37■□□□□ 0.53
SNRPA1-201ENST00000254193 PATE3B3GLJ2 98 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 EEF2KO00418 725 aaKnown RBP18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 IL1BP01584 269 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 H2AFZP0C0S5 128 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 ETFBP38117 255 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 LMNB2Q03252 620 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 ACAP1Q15027 740 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 POLD3Q15054 466 aaPredicted RBP18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 KCNT1Q5JUK3 1230 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 LEKR1Q6ZMV7 388 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 H2AFVQ71UI9 128 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 SYT12Q8IV01 421 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 TC2NQ8N9U0 490 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 C12orf50Q8NA57 414 aaPredicted RBP18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 ZNF564Q8TBZ8 553 aaPredicted RBP18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 CTNNBL1Q8WYA6 563 aaPredicted RBP18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 OR8D1Q8WZ84 308 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 NCAPGQ9BPX3 1015 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 TNKS2Q9H2K2 1166 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 CATSPERBQ9H7T0 1116 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 ZWILCHQ9H900 591 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 RXFP3Q9NSD7 469 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 PILRBQ9UKJ0 227 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 SARDHQ9UL12 918 aa18.36■□□□□ 0.53
SNRPA1-201ENST00000254193 A0A1W2PP55 124 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 WASH4PA8MWX3 477 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 MYO1FO00160 1098 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 GDF9O60383 454 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 MAOBP27338 520 aa18.35■□□□□ 0.53
SNRPA1-201ENST00000254193 SERPINH1P50454 418 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms