RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 SCYL2Q6P3W7 929 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 STRADAQ7RTN6 431 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 MCOLN2Q8IZK6 566 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 CPLX3Q8WVH0 158 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 ALG14Q96F25 216 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 MCEEQ96PE7 176 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 SPON2Q9BUD6 331 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 GTPBP2Q9BX10 602 aaKnown RBP17.08■□□□□ 0.32
SREBF1-219ENST00000580540 BTBD1Q9H0C5 482 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 TMEM9BQ9NQ34 198 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 FBXL12Q9NXK8 326 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 EVLQ9UI08 416 aaPredicted RBP17.08■□□□□ 0.32
SREBF1-219ENST00000580540 SLC6A14Q9UN76 642 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 PI4KAP42356 2102 aa17.08■□□□□ 0.32
SREBF1-219ENST00000580540 ITIH6Q6UXX5 1313 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 FAM47DPA6NHR8 397 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 MID1O15344 667 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 SNAP91O60641 907 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 IGLV3-19P01714 112 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 GNSP15586 552 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 RRM1P23921 792 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 HOXD12P35452 270 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 GSCP56915 257 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 RPL7AP62424 266 aaKnown RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 KRT83P78385 493 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 GFPT1Q06210 699 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 CST6Q15828 149 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 C6orf118Q5T5N4 469 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 E4F1Q66K89 784 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 SLC23A3Q6PIS1 610 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 ZNF571Q7Z3V5 609 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 RABEPKQ7Z6M1 372 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 DNAAF5Q86Y56 855 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 DRC7Q8IY82 874 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 CCDC185Q8N715 623 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 CADM4Q8NFZ8 388 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 PTPRN2Q92932 1015 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 OMDQ99983 421 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 MAGEB5Q9BZ81 275 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 EDEM3Q9BZQ6 932 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 ZYG11BQ9C0D3 744 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 PABPC3Q9H361 631 aaKnown RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 C6orf106Q9H6K1 298 aaPredicted RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 AIPL1Q9NZN9 384 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 IFNKQ9P0W0 207 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 OR12D3Q9UGF7 316 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 OR51B4Q9Y5P0 310 aa17.07■□□□□ 0.32
SREBF1-219ENST00000580540 TNRC6BQ9UPQ9 1833 aaKnown RBP17.07■□□□□ 0.32
SREBF1-219ENST00000580540 NUMA1Q14980 2115 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 DCHS1Q96JQ0 3298 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 IGLV3-10A0A075B6K4 115 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 A0A0D9SEW6 157 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 A0A1W2PP55 124 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 MED19A0JLT2 244 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 METTL12A8MUP2 240 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 CCP110O43303 1012 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 RNASEH2AO75792 299 aaKnown RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SEMA4FO95754 770 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 IL1BP01584 269 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SERPINF2P08697 491 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 ENGP17813 658 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SLC8A1P32418 973 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 HDAC4P56524 1084 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SFSWAPQ12872 951 aaKnown RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 ARID5BQ14865 1188 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 DLG2Q15700 870 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 DAB2IPQ5VWQ8 1189 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 PEAR1Q5VY43 1037 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 PPP1R2P3Q6NXS1 205 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SETD3Q86TU7 594 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 ZCCHC9Q8N567 271 aaKnown RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 ATP11CQ8NB49 1132 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 OR7D4Q8NG98 312 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 CENPIQ92674 756 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 FAM129BQ96TA1 746 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SYT11Q9BT88 431 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 C2orf49Q9BVC5 232 aaPredicted RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 TTYH3Q9C0H2 523 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SUSD2Q9UGT4 822 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 EIF2B4Q9UI10 523 aaKnown RBP17.06■□□□□ 0.32
SREBF1-219ENST00000580540 SCML1Q9UN30 329 aa17.06■□□□□ 0.32
SREBF1-219ENST00000580540 ATMINO43313 823 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-219ENST00000580540 FSBPO95073 299 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 MT-CO1P00395 513 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 FTLP02792 175 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-219ENST00000580540 PLEKP08567 350 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-219ENST00000580540 DESP17661 470 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 ZNF143P52747 638 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-219ENST00000580540 FOXK2Q01167 660 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 TDRD12Q587J7 1177 aaKnown RBP17.05■□□□□ 0.32
SREBF1-219ENST00000580540 PPM1JQ5JR12 505 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 Q6ZVU0 165 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 SLFN11Q7Z7L1 901 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 HDDC3Q8N4P3 179 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 FRS2Q8WU20 508 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 PSMB7Q99436 277 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.05■□□□□ 0.32
SREBF1-219ENST00000580540 OSBPL2Q9H1P3 480 aa17.05■□□□□ 0.32
SREBF1-219ENST00000580540 SGK2Q9HBY8 427 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms