RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 TCHPQ9BT92 498 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 TARS2Q9BW92 718 aaKnown RBP4.14□□□□□ -1.75
PVT1-211ENST00000521600 CAPS2Q9BXY5 557 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 NFKBIZQ9BYH8 718 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 RNPEPQ9H4A4 650 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 GOLPH3Q9H4A6 298 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 FAM124BQ9H5Z6 455 aaPredicted RBP4.14□□□□□ -1.75
PVT1-211ENST00000521600 AGO3Q9H9G7 860 aaKnown RBP4.14□□□□□ -1.75
PVT1-211ENST00000521600 TMBIM4Q9HC24 238 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 TOPORSQ9NS56 1045 aaPredicted RBP4.14□□□□□ -1.75
PVT1-211ENST00000521600 SETD4Q9NVD3 440 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 PARVAQ9NVD7 372 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 ANKFY1Q9P2R3 1169 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 IP6K2Q9UHH9 426 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 ANAPC7Q9UJX3 599 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 WASF3Q9UPY6 502 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 CNTN6Q9UQ52 1028 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 PLAAQ9Y263 795 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 PCDHB4Q9Y5E5 795 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 COL4A2P08572 1712 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 TEP1Q99973 2627 aaKnown RBP4.14□□□□□ -1.75
PVT1-211ENST00000521600 COL1A2P08123 1366 aa4.14□□□□□ -1.75
PVT1-211ENST00000521600 CACNA1EQ15878 2313 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 PLXNB3Q9ULL4 1909 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 PTPN13Q12923 2485 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 IGKV6-21A0A0C4DH24 114 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 BLACEA4D250 179 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ZSCAN5CA6NGD5 496 aaPredicted RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 WASH4PA8MWX3 477 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ACKR2O00590 384 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 EIF3HO15372 352 aaKnown RBP eCLIP4.13□□□□□ -1.75
PVT1-211ENST00000521600 MAGEB2O15479 319 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 MED7O43513 233 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 DLX3O60479 287 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 VNN1O95497 513 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TOP3BO95985 862 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 ASS1P00966 412 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 CAPNS1P04632 268 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 GSNP06396 782 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 CD3EP07766 207 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 SNRPB2P08579 225 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 NUDT17P0C025 328 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TMEM191BP0C7N4 346 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 EPCAMP16422 314 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 FSTP19883 344 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 NR1D1P20393 614 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TMOD1P28289 359 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ATP5DP30049 168 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ECHS1P30084 290 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 COILP38432 576 aaPredicted RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 PBX3P40426 434 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 MTHFRP42898 656 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 IRAK1P51617 712 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 PMS2P54278 862 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 HNRNPH2P55795 449 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 GFRA1P56159 465 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 SUMO1P63165 101 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 GNGT1P63211 74 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 NOMO3P69849 1222 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ADAM17P78536 824 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 MRPS25P82663 173 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 POU4F1Q01851 419 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 UBE3AQ05086 875 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 POU5F1BQ06416 359 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ADCY2Q08462 1091 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 PPP1R7Q15435 360 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 LPAL2Q16609 132 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 NKPD1Q17RQ9 610 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 PRSS53Q2L4Q9 553 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 SGSM1Q2NKQ1 1148 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ZNF528Q3MIS6 628 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 FAM153CQ494X1 144 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 ODF2Q5BJF6 829 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TTMPQ5BVD1 217 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 DNAJC21Q5F1R6 531 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 ZNF484Q5JVG2 852 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 FBXO47Q5MNV8 452 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 CEP85LQ5SZL2 805 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 LRRC38Q5VT99 294 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 NAA35Q5VZE5 725 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 DENND2CQ68D51 928 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 CES5AQ6NT32 575 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 CCDC137Q6PK04 289 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 TMEM270Q6UE05 265 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 MPZL3Q6UWV2 235 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 CRELD2Q6UXH1 353 aaPredicted RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 LRRC31Q6UY01 552 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TSHZ1Q6ZSZ6 1077 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 MICALCLQ6ZW33 695 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 B4GALNT4Q76KP1 1039 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TRMT10CQ7L0Y3 403 aaKnown RBP4.13□□□□□ -1.75
PVT1-211ENST00000521600 MON1BQ7L1V2 547 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 RSPH3Q86UC2 560 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 DNAAF5Q86Y56 855 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 SCUBE1Q8IWY4 988 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 RHOT1Q8IXI2 618 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TTC39CQ8N584 583 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 COLGALT1Q8NBJ5 622 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 RNF149Q8NC42 400 aa4.13□□□□□ -1.75
PVT1-211ENST00000521600 TMEM35BQ8NCS4 154 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms