RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	ZNF347	Q96SE7	839 aa		6.3	□□□□□ -1.4
LINC01088-208	ENST00000511895	RIPOR2	Q9Y4F9	1068 aa		6.3	□□□□□ -1.4
LINC01088-208	ENST00000511895	TNS2	Q63HR2	1409 aa		6.3	□□□□□ -1.4
LINC01088-208	ENST00000511895	DPPA5	A6NC42	116 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895		H0Y3Z8	333 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	PPEF2	O14830	753 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	TLR2	O60603	784 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	HEXIM1	O94992	359 aa	Known RBP	6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	NFATC1	O95644	943 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	IGFBP2	P18065	325 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	POSTN	Q15063	836 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	RBMS2	Q15434	407 aa	Known RBP	6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	C10orf25	Q5T742	122 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	LRIG3	Q6UXM1	1119 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	GALNT15	Q8N3T1	639 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	C16orf52	Q8NHV5	167 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	FAM167B	Q9BTA0	163 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	TUBB6	Q9BUF5	446 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	MYLK2	Q9H1R3	596 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	PPCS	Q9HAB8	311 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	ELOVL5	Q9NYP7	299 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	KCND3	Q9UK17	655 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	LZTS1	Q9Y250	596 aa		6.29	□□□□□ -1.4
LINC01088-208	ENST00000511895	PCNT	O95613	3336 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	NLRP1	Q9C000	1473 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	ZNF521	Q96K83	1311 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	SHANK3	Q9BYB0	1731 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	PLEKHD1	A6NEE1	506 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	LMO1	P25800	156 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	CIITA	P33076	1130 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	GRK6	P43250	576 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	CDK7	P50613	346 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	PDCL	Q13371	301 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	GPR162	Q16538	588 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	DGAT2L7P	Q6IED9	249 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	ZNF425	Q6IV72	752 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	ERAP2	Q6P179	960 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	DEF8	Q6ZN54	512 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	SYT13	Q7L8C5	426 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	MRPL10	Q7Z7H8	261 aa	Known RBP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	CSGALNACT1	Q8TDX6	532 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	TRIM63	Q969Q1	353 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	COQ8B	Q96D53	544 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	ADAD1	Q96M93	576 aa	Known RBP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	PIGS	Q96S52	555 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	DDX23	Q9BUQ8	820 aa	Known RBP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	C1QTNF7	Q9BXJ2	289 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	PDE11A	Q9HCR9	933 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	SAYSD1	Q9NPB0	183 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	PAPOLB	Q9NRJ5	636 aa	Known RBP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	SRP68	Q9UHB9	627 aa	Known RBP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	KDM5A	P29375	1690 aa	Known RBP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	PRDM15	P57071	1507 aa	Predicted RBP	6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	ZMYM2	Q9UBW7	1377 aa		6.28	□□□□□ -1.4
LINC01088-208	ENST00000511895	BRWD3	Q6RI45	1802 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	KIDINS220	Q9ULH0	1771 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895		E7EVH7	732 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	VEGFA	P15692	232 aa	Predicted RBP	6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	CST5	P28325	142 aa	Predicted RBP	6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	PRKAA2	P54646	552 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	B4GALNT1	Q00973	533 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	PGM5	Q15124	567 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	ARL13A	Q5H913	290 aa	Predicted RBP	6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	C10orf76	Q5T2E6	689 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	C11orf87	Q6NUJ2	197 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	KIAA1324	Q6UXG2	1013 aa	Known RBP	6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	CYB5R4	Q7L1T6	521 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	SPATA5	Q8NB90	893 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	OR52N4	Q8NGI2	321 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	OR6Y1	Q8NGX8	325 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	AAMDC	Q9H7C9	122 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	SLC25A13	Q9UJS0	675 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	UTS2R	Q9UKP6	389 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	TNFSF13B	Q9Y275	285 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	MORC2	Q9Y6X9	1032 aa	Predicted RBP	6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	MYO5C	Q9NQX4	1742 aa		6.27	□□□□□ -1.41
LINC01088-208	ENST00000511895	SETD5	Q9C0A6	1442 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	MOSPD3	O75425	235 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	PRF1	P14222	555 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	PTGER1	P34995	402 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	RBM5	P52756	815 aa	Known RBP eCLIP	6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	CUL4B	Q13620	913 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	GALNT3	Q14435	633 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	B4GALNT4	Q76KP1	1039 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	C1QL2	Q7Z5L3	287 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	KCNJ9	Q92806	393 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	ATP2A3	Q93084	1043 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	ARRDC3	Q96B67	414 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	PIMREG	Q9BSJ6	248 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	TMLHE	Q9NVH6	421 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	KIF17	Q9P2E2	1029 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	FBXO4	Q9UKT5	387 aa		6.26	□□□□□ -1.41
LINC01088-208	ENST00000511895	CXorf65	A6NEN9	183 aa		6.25	□□□□□ -1.41
LINC01088-208	ENST00000511895	GRM8	O00222	908 aa		6.25	□□□□□ -1.41
LINC01088-208	ENST00000511895	IFRD1	O00458	451 aa	Predicted RBP	6.25	□□□□□ -1.41
LINC01088-208	ENST00000511895	PRPF4	O43172	522 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
LINC01088-208	ENST00000511895	MSI1	O43347	362 aa	Known RBP	6.25	□□□□□ -1.41
LINC01088-208	ENST00000511895	HNRNPR	O43390	633 aa	Known RBP	6.25	□□□□□ -1.41
LINC01088-208	ENST00000511895	AARS	P49588	968 aa	Known RBP eCLIP	6.25	□□□□□ -1.41	5e-7	■■■■■ 34.9

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms