RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 MARCH9Q86YJ5 346 aa8.53□□□□□ -1.04
APP-216ENST00000491395 FAM114A1Q8IWE2 563 aa8.53□□□□□ -1.04
APP-216ENST00000491395 TBC1D3Q8IZP1 549 aaPredicted RBP8.53□□□□□ -1.04
APP-216ENST00000491395 ZNF397Q8NF99 534 aaPredicted RBP8.53□□□□□ -1.04
APP-216ENST00000491395 OR14C36Q8NHC7 312 aa8.53□□□□□ -1.04
APP-216ENST00000491395 CDC6Q99741 560 aa8.53□□□□□ -1.04
APP-216ENST00000491395 TUBGCP2Q9BSJ2 902 aa8.53□□□□□ -1.04
APP-216ENST00000491395 FEM1AQ9BSK4 669 aa8.53□□□□□ -1.04
APP-216ENST00000491395 ACE2Q9BYF1 805 aaPredicted RBP8.53□□□□□ -1.04
APP-216ENST00000491395 SIK2Q9H0K1 926 aa8.53□□□□□ -1.04
APP-216ENST00000491395 PDCL3Q9H2J4 239 aa8.53□□□□□ -1.04
APP-216ENST00000491395 SAMSN1Q9NSI8 373 aaKnown RBP8.53□□□□□ -1.04
APP-216ENST00000491395 PIGVQ9NUD9 493 aa8.53□□□□□ -1.04
APP-216ENST00000491395 TOR4AQ9NXH8 423 aa8.53□□□□□ -1.04
APP-216ENST00000491395 SARDHQ9UL12 918 aa8.53□□□□□ -1.04
APP-216ENST00000491395 FZD4Q9ULV1 537 aa8.53□□□□□ -1.04
APP-216ENST00000491395 OR51B4Q9Y5P0 310 aa8.53□□□□□ -1.04
APP-216ENST00000491395 FHOD1Q9Y613 1164 aa8.53□□□□□ -1.04
APP-216ENST00000491395 FAM208BQ5VWN6 2430 aa8.53□□□□□ -1.04
APP-216ENST00000491395 ANKRD11Q6UB99 2663 aaPredicted RBP8.53□□□□□ -1.04
APP-216ENST00000491395 CKAP5Q14008 2032 aa8.53□□□□□ -1.04
APP-216ENST00000491395 ZFHX4Q86UP3 3567 aa8.52□□□□□ -1.04
APP-216ENST00000491395 A0A1B0GTQ1 180 aa8.52□□□□□ -1.05
APP-216ENST00000491395 A0A1W2PR77 199 aa8.52□□□□□ -1.05
APP-216ENST00000491395 PES1O00541 588 aaKnown RBP8.52□□□□□ -1.05
APP-216ENST00000491395 ZZEF1O43149 2961 aa8.52□□□□□ -1.05
APP-216ENST00000491395 ATP9BO43861 1147 aa8.52□□□□□ -1.05
APP-216ENST00000491395 RTN2O75298 545 aa8.52□□□□□ -1.05
APP-216ENST00000491395 CLDN11O75508 207 aa8.52□□□□□ -1.05
APP-216ENST00000491395 MT-CO1P00395 513 aa8.52□□□□□ -1.05
APP-216ENST00000491395 CYP11B1P15538 503 aa8.52□□□□□ -1.05
APP-216ENST00000491395 ERCC5P28715 1186 aaPredicted RBP8.52□□□□□ -1.05
APP-216ENST00000491395 CD38P28907 300 aa8.52□□□□□ -1.05
APP-216ENST00000491395 DRD3P35462 400 aa8.52□□□□□ -1.05
APP-216ENST00000491395 GRK6P43250 576 aa8.52□□□□□ -1.05
APP-216ENST00000491395 CXCR3P49682 368 aa8.52□□□□□ -1.05
APP-216ENST00000491395 CCT8P50990 548 aa8.52□□□□□ -1.05
APP-216ENST00000491395 CCR5P51681 352 aa8.52□□□□□ -1.05
APP-216ENST00000491395 ADPRHP54922 357 aa8.52□□□□□ -1.05
APP-216ENST00000491395 OXCT1P55809 520 aa8.52□□□□□ -1.05
APP-216ENST00000491395 SNX16P57768 344 aa8.52□□□□□ -1.05
APP-216ENST00000491395 BPIFB4P59827 614 aa8.52□□□□□ -1.05
APP-216ENST00000491395 PPP2CBP62714 309 aa8.52□□□□□ -1.05
APP-216ENST00000491395 PPP2CAP67775 309 aa8.52□□□□□ -1.05
APP-216ENST00000491395 CNTN1Q12860 1018 aa8.52□□□□□ -1.05
APP-216ENST00000491395 RAPGEF1Q13905 1077 aa8.52□□□□□ -1.05
APP-216ENST00000491395 ELAVL3Q14576 367 aaKnown RBP8.52□□□□□ -1.05
APP-216ENST00000491395 SHBQ15464 509 aa8.52□□□□□ -1.05
APP-216ENST00000491395 DLG2Q15700 870 aa8.52□□□□□ -1.05
APP-216ENST00000491395 POM121L1PQ3SYA9 428 aa8.52□□□□□ -1.05
APP-216ENST00000491395 C5orf22Q49AR2 442 aa8.52□□□□□ -1.05
APP-216ENST00000491395 ALFQ53S48 1182 aa8.52□□□□□ -1.05
APP-216ENST00000491395 C2CD6Q53TS8 623 aa8.52□□□□□ -1.05
APP-216ENST00000491395 CCDC157Q569K6 752 aa8.52□□□□□ -1.05
APP-216ENST00000491395 SMYD5Q6GMV2 418 aa8.52□□□□□ -1.05
APP-216ENST00000491395 LRSAM1Q6UWE0 723 aa8.52□□□□□ -1.05
APP-216ENST00000491395 SND1Q7KZF4 910 aaKnown RBP eCLIP8.52□□□□□ -1.052e-7■■■□□ 17.6
APP-216ENST00000491395 TMEM35BQ8NCS4 154 aa8.52□□□□□ -1.05
APP-216ENST00000491395 OR8D1Q8WZ84 308 aa8.52□□□□□ -1.05
APP-216ENST00000491395 SERAC1Q96JX3 654 aa8.52□□□□□ -1.05
APP-216ENST00000491395 SPAG5Q96R06 1193 aa8.52□□□□□ -1.05
APP-216ENST00000491395 TBCBQ99426 244 aa8.52□□□□□ -1.05
APP-216ENST00000491395 NPY6RQ99463 290 aa8.52□□□□□ -1.05
APP-216ENST00000491395 TKTL2Q9H0I9 626 aa8.52□□□□□ -1.05
APP-216ENST00000491395 WDCPQ9H6R7 721 aa8.52□□□□□ -1.05
APP-216ENST00000491395 AASDHPPTQ9NRN7 309 aa8.52□□□□□ -1.05
APP-216ENST00000491395 TMPRSS4Q9NRS4 437 aa8.52□□□□□ -1.05
APP-216ENST00000491395 ARHGEF38Q9NXL2 777 aa8.52□□□□□ -1.05
APP-216ENST00000491395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.52□□□□□ -1.05
APP-216ENST00000491395 VPS28Q9UK41 221 aa8.52□□□□□ -1.05
APP-216ENST00000491395 PPM1HQ9ULR3 514 aa8.52□□□□□ -1.05
APP-216ENST00000491395 TBC1D30Q9Y2I9 924 aa8.52□□□□□ -1.05
APP-216ENST00000491395 MUC22E2RYF6 1773 aaPredicted RBP8.51□□□□□ -1.05
APP-216ENST00000491395 CEP192Q8TEP8 1941 aa8.51□□□□□ -1.05
APP-216ENST00000491395 DRGXA6NNA5 263 aa8.51□□□□□ -1.05
APP-216ENST00000491395 GOLGA8SH3BPF8 625 aa8.51□□□□□ -1.05
APP-216ENST00000491395 K7ERQ8 282 aa8.51□□□□□ -1.05
APP-216ENST00000491395 TNFSF14O43557 240 aa8.51□□□□□ -1.05
APP-216ENST00000491395 BNIP3LO60238 219 aa8.51□□□□□ -1.05
APP-216ENST00000491395 PCDHGA12O60330 932 aa8.51□□□□□ -1.05
APP-216ENST00000491395 SNAP91O60641 907 aa8.51□□□□□ -1.05
APP-216ENST00000491395 DKK1O94907 266 aa8.51□□□□□ -1.05
APP-216ENST00000491395 SRCP12931 536 aa8.51□□□□□ -1.05
APP-216ENST00000491395 ZNF18P17022 549 aa8.51□□□□□ -1.05
APP-216ENST00000491395 MAT2AP31153 395 aaKnown RBP8.51□□□□□ -1.05
APP-216ENST00000491395 CDH5P33151 784 aaPredicted RBP8.51□□□□□ -1.05
APP-216ENST00000491395 GABRB2P47870 512 aa8.51□□□□□ -1.05
APP-216ENST00000491395 SULT1E1P49888 294 aa8.51□□□□□ -1.05
APP-216ENST00000491395 VASPP50552 380 aaPredicted RBP8.51□□□□□ -1.05
APP-216ENST00000491395 CDH4P55283 916 aa8.51□□□□□ -1.05
APP-216ENST00000491395 DEUP1Q05D60 604 aa8.51□□□□□ -1.05
APP-216ENST00000491395 MTA1Q13330 715 aa8.51□□□□□ -1.05
APP-216ENST00000491395 BRMS1LQ5PSV4 323 aa8.51□□□□□ -1.05
APP-216ENST00000491395 FAM102AQ5T9C2 384 aaPredicted RBP8.51□□□□□ -1.05
APP-216ENST00000491395 FAM46CQ5VWP2 391 aa8.51□□□□□ -1.05
APP-216ENST00000491395 Q6ZVU0 165 aa8.51□□□□□ -1.05
APP-216ENST00000491395 TMPRSS7Q7RTY8 843 aa8.51□□□□□ -1.05
APP-216ENST00000491395 NOP9Q86U38 636 aaKnown RBP8.51□□□□□ -1.05
APP-216ENST00000491395 ERICH1Q86X53 443 aa8.51□□□□□ -1.05
APP-216ENST00000491395 XYLT1Q86Y38 959 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms