RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 FAM46CQ5VWP2 391 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 TMPRSS7Q7RTY8 843 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 SLC47A2Q86VL8 602 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 GALNT15Q8N3T1 639 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 FRS2Q8WU20 508 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 ELF4Q99607 663 aaPredicted RBP20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 KDM4CQ9H3R0 1056 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 TMEM51Q9NW97 253 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 AJAP1Q9UKB5 411 aaPredicted RBP20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 STAP1Q9ULZ2 295 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 PAXBP1Q9Y5B6 917 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 HS3ST4Q9Y661 456 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 LAMA5O15230 3695 aa20.05■□□□□ 0.8
R3HDM1-215ENST00000483021 M0QYT0 321 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 FOXN3O00409 490 aaPredicted RBP20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 KCNK3O14649 394 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 ALOX15BO15296 676 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 YKT6O15498 198 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 ATP9BO43861 1147 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 PAGE1O75459 146 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 CAPNS1P04632 268 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 CLCN1P35523 988 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 NUDT1P36639 197 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 MAPK8IP2Q13387 824 aaPredicted RBP20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 KCNJ12Q14500 433 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 BRMS1LQ5PSV4 323 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 FAM71AQ8IYT1 594 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 FAM131CQ96AQ9 280 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 FEM1AQ9BSK4 669 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 PDCL3Q9H2J4 239 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 NDST4Q9H3R1 872 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 EBF2Q9HAK2 575 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 GDF3Q9NR23 364 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 FTSJ1Q9UET6 329 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 DACH1Q9UI36 760 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 VPS28Q9UK41 221 aa20.04■□□□□ 0.8
R3HDM1-215ENST00000483021 GOLGA4Q13439 2230 aaKnown RBP20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 C1QTNF3-AMACRE9PGA6 284 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 LATO43561 262 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 VAV1P15498 845 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 DRD3P35462 400 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 CDH4P55283 916 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 IL9RQ01113 521 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 C5orf22Q49AR2 442 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 ACCSLQ4AC99 568 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 VWA3BQ502W6 1294 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 TMEM35BQ8NCS4 154 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 ALG14Q96F25 216 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 SERAC1Q96JX3 654 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 NPY6RQ99463 290 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 TUBGCP2Q9BSJ2 902 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 CCDC86Q9H6F5 360 aaKnown RBP20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D30Q9Y2I9 924 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 DOCK4Q8N1I0 1966 aa20.03■□□□□ 0.8
R3HDM1-215ENST00000483021 APC2O95996 2303 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3DA0A087WVF3 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3IA0A087WXS9 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3EA0A087X179 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3KA0A087X1G2 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3FA6NER0 549 aaPredicted RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 GOLGA8CPA6NN73 597 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3LB9A6J9 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 WNT1P04628 370 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3HP0C7X1 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 ERCC5P28715 1186 aaPredicted RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 CDH5P33151 784 aaPredicted RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 SCNN1AP37088 669 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 NUMBP49757 651 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 IRAK1P51617 712 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 ACBD5Q5T8D3 534 aaPredicted RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3GQ6DHY5 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3CQ6IPX1 549 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 NAPEPLDQ6IQ20 393 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 PRPF39Q86UA1 669 aaKnown RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 TBC1D3Q8IZP1 549 aaPredicted RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 OXR1Q8N573 874 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 PGAP3Q96FM1 320 aaPredicted RBP20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 SIK2Q9H0K1 926 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 MUC3BQ9H195 1237 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 CLSTN2Q9H4D0 955 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 WDCPQ9H6R7 721 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 PLCB1Q9NQ66 1216 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 PIGVQ9NUD9 493 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 ARHGEF38Q9NXL2 777 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 CHMP5Q9NZZ3 219 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 OR51B4Q9Y5P0 310 aa20.02■□□□□ 0.8
R3HDM1-215ENST00000483021 CACNA1GO43497 2377 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 A0A1W2PR77 199 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 MCF2LO15068 1137 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 PLRG1O43660 514 aaKnown RBP20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 F9P00740 461 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 PNMA6AP0CW24 399 aaPredicted RBP20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 GGCXP38435 758 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 ARRB1P49407 418 aaPredicted RBP20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 CXCR3P49682 368 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 SULT1E1P49888 294 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 KRT83P78385 493 aa20.01■□□□□ 0.79
R3HDM1-215ENST00000483021 RAPGEF1Q13905 1077 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms