RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 CEP192Q8TEP8 1941 aa24.67■■□□□ 1.54
CPNE1-223ENST00000475146 CEP250Q9BV73 2442 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 MEI4A8MW99 385 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 FTLP02792 175 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-223ENST00000475146 KRT83P78385 493 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 ZBED6P86452 979 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 NFKBIBQ15653 356 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 ACCSLQ4AC99 568 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 TRIM61Q5EBN2 209 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 RWDD4Q6NW29 188 aaKnown RBP24.66■■□□□ 1.54
CPNE1-223ENST00000475146 SCYL2Q6P3W7 929 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 RGL4Q8IZJ4 473 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 RNF214Q8ND24 703 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 GANCQ8TET4 914 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 ZNF419Q96HQ0 510 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-223ENST00000475146 CNPY3Q9BT09 278 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 C2orf49Q9BVC5 232 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-223ENST00000475146 PARVAQ9NVD7 372 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 PPARGC1AQ9UBK2 798 aaKnown RBP24.66■■□□□ 1.54
CPNE1-223ENST00000475146 PILRBQ9UKJ0 227 aa24.66■■□□□ 1.54
CPNE1-223ENST00000475146 CFIP05156 583 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 GZMAP12544 262 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 MAMLD1Q13495 774 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 SYCP2LQ5T4T6 812 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 MMAAQ8IVH4 418 aaKnown RBP24.65■■□□□ 1.54
CPNE1-223ENST00000475146 DRC7Q8IY82 874 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 STK40Q8N2I9 435 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 SYN2Q92777 582 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-223ENST00000475146 NTAN1Q96AB6 310 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 ZNF653Q96CK0 615 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 PSMB7Q99436 277 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 RTKNQ9BST9 563 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.65■■□□□ 1.54
CPNE1-223ENST00000475146 OSBPL2Q9H1P3 480 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 CAPN11Q9UMQ6 739 aa24.65■■□□□ 1.54
CPNE1-223ENST00000475146 LUC7L2Q9Y383 392 aaKnown RBP24.65■■□□□ 1.54
CPNE1-223ENST00000475146 BZW2Q9Y6E2 419 aaKnown RBP24.65■■□□□ 1.54
CPNE1-223ENST00000475146 GON4LQ3T8J9 2241 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 A0A0D9SEW6 157 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 LNP1A1A4G5 178 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 SLC30A4O14863 429 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 SNAP91O60641 907 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 RTN2O75298 545 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 PLEKP08567 350 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-223ENST00000475146 VAV1P15498 845 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 HOXD12P35452 270 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 PSMD8P48556 350 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 OGDHQ02218 1023 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 NRG1Q02297 640 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-223ENST00000475146 CST6Q15828 149 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 EFHC2Q5JST6 749 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 WDR45BQ5MNZ6 344 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 ARTNQ5T4W7 220 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 MANEALQ5VSG8 457 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 PLEKHA7Q6IQ23 1121 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 DGLUCYQ7Z3D6 616 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 TMC6Q7Z403 805 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 SLFN11Q7Z7L1 901 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 VPS36Q86VN1 386 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 DCAF4L2Q8NA75 395 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 OR7D4Q8NG98 312 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 PTPRN2Q92932 1015 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 NUSAP1Q9BXS6 441 aaKnown RBP24.64■■□□□ 1.54
CPNE1-223ENST00000475146 PABPC3Q9H361 631 aaKnown RBP24.64■■□□□ 1.54
CPNE1-223ENST00000475146 CNOT8Q9UFF9 292 aaKnown RBP24.64■■□□□ 1.54
CPNE1-223ENST00000475146 EVLQ9UI08 416 aaPredicted RBP24.64■■□□□ 1.54
CPNE1-223ENST00000475146 VPS51Q9UID3 782 aa24.64■■□□□ 1.54
CPNE1-223ENST00000475146 FAM72CH0Y354 149 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 CBFA2T2O43439 604 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 LRIG2O94898 1065 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 GYPCP04921 128 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 C7P10643 843 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 PSMA2P25787 234 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 IRX4P78413 519 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 ELAVL3Q14576 367 aaKnown RBP24.63■■□□□ 1.53
CPNE1-223ENST00000475146 STPG1Q5TH74 334 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 FAM72AQ5TYM5 149 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 PEAR1Q5VY43 1037 aaPredicted RBP24.63■■□□□ 1.53
CPNE1-223ENST00000475146 HGSNATQ68CP4 663 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 FAM72DQ6L9T8 149 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 FAM72BQ86X60 149 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 CADM4Q8NFZ8 388 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 FRS2Q8WU20 508 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 TBC1D31Q96DN5 1066 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 TRIM11Q96F44 468 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 SPON2Q9BUD6 331 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 MAGEB5Q9BZ81 275 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 BTBD1Q9H0C5 482 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 ZNF212Q9UDV6 495 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 SCML1Q9UN30 329 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 NCKAP1Q9Y2A7 1128 aa24.63■■□□□ 1.53
CPNE1-223ENST00000475146 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.63■■□□□ 1.53
CPNE1-223ENST00000475146 SPTBN4Q9H254 2564 aa24.62■■□□□ 1.53
CPNE1-223ENST00000475146 WDR87Q6ZQQ6 2873 aa24.62■■□□□ 1.53
CPNE1-223ENST00000475146 ILVBLA1L0T0 632 aa24.62■■□□□ 1.53
CPNE1-223ENST00000475146 MID1O15344 667 aa24.62■■□□□ 1.53
CPNE1-223ENST00000475146 ATP9BO43861 1147 aa24.62■■□□□ 1.53
CPNE1-223ENST00000475146 SERPING1P05155 500 aa24.62■■□□□ 1.53
CPNE1-223ENST00000475146 MAOBP27338 520 aa24.62■■□□□ 1.53
CPNE1-223ENST00000475146 ACSL1P33121 698 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 185.5 ms