RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 ZNF217O75362 1048 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 IPO7O95373 1038 aaKnown RBP23.9■■□□□ 1.42
SUMO3-205ENST00000466861 GABRG2P18507 467 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 MAGEA1P43355 309 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 HADHBP55084 474 aaKnown RBP23.9■■□□□ 1.42
SUMO3-205ENST00000466861 GSDMDP57764 484 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 GNA12Q03113 381 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 SLC20A2Q08357 652 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 HNRNPA1L2Q32P51 320 aaKnown RBP23.9■■□□□ 1.42
SUMO3-205ENST00000466861 PYROXD2Q8N2H3 581 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 OR2T3Q8NH03 318 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 SLC35G2Q8TBE7 412 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 MAGEB5Q9BZ81 275 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 DHX35Q9H5Z1 703 aaKnown RBP23.9■■□□□ 1.42
SUMO3-205ENST00000466861 BCCIPQ9P287 314 aaKnown RBP eCLIP23.9■■□□□ 1.42
SUMO3-205ENST00000466861 HS3ST2Q9Y278 367 aa23.9■■□□□ 1.42
SUMO3-205ENST00000466861 EPN1Q9Y6I3 576 aaPredicted RBP23.9■■□□□ 1.42
SUMO3-205ENST00000466861 HRO43593 1189 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 CREB3O43889 395 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 RPP40O75818 363 aaKnown RBP23.89■■□□□ 1.41
SUMO3-205ENST00000466861 NDUFA10O95299 355 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 PXNP49023 591 aaPredicted RBP23.89■■□□□ 1.41
SUMO3-205ENST00000466861 CLCN6P51797 869 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 YBEYP58557 167 aaPredicted RBP23.89■■□□□ 1.41
SUMO3-205ENST00000466861 TPI1P60174 286 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 DPYSL2Q16555 572 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 HMGB4Q8WW32 186 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 CALR3Q96L12 384 aaKnown RBP23.89■■□□□ 1.41
SUMO3-205ENST00000466861 PSMB7Q99436 277 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 RAD54BQ9Y620 910 aa23.89■■□□□ 1.41
SUMO3-205ENST00000466861 A0A0A6YYK5 440 aaPredicted RBP23.88■■□□□ 1.41
SUMO3-205ENST00000466861 EDDM13A0A1B0GTR0 161 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 ATP9BO43861 1147 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 LMNAP02545 664 aaKnown RBP23.88■■□□□ 1.41
SUMO3-205ENST00000466861 IL1R2P27930 398 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 CTSOP43234 321 aaPredicted RBP23.88■■□□□ 1.41
SUMO3-205ENST00000466861 SLC25A11Q02978 314 aaKnown RBP23.88■■□□□ 1.41
SUMO3-205ENST00000466861 ZBTB16Q05516 673 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 RETSATQ6NUM9 610 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 UMODL1-AS1Q8N2C9 162 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 BTBD6Q96KE9 485 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 SPACA7Q96KW9 195 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 MRGPRX1Q96LB2 322 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 BAG1Q99933 345 aaPredicted RBP23.88■■□□□ 1.41
SUMO3-205ENST00000466861 ACE2Q9BYF1 805 aaPredicted RBP23.88■■□□□ 1.41
SUMO3-205ENST00000466861 OSGEPQ9NPF4 335 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 PRSS16Q9NQE7 514 aa23.88■■□□□ 1.41
SUMO3-205ENST00000466861 A0A0D9SEW6 157 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 EEF2KO00418 725 aaKnown RBP23.87■■□□□ 1.41
SUMO3-205ENST00000466861 RAMP2O60895 175 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 NDUFV2P19404 249 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 P2RY2P41231 377 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 GEMIN4P57678 1058 aaKnown RBP23.87■■□□□ 1.41
SUMO3-205ENST00000466861 PGBD3Q8N328 593 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 SUMF1Q8NBK3 374 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 ARHGEF2Q92974 986 aaKnown RBP23.87■■□□□ 1.41
SUMO3-205ENST00000466861 ZC3H10Q96K80 434 aaKnown RBP23.87■■□□□ 1.41
SUMO3-205ENST00000466861 ZWILCHQ9H900 591 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 PRDM16Q9HAZ2 1276 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 RCOR3Q9P2K3 495 aaPredicted RBP23.87■■□□□ 1.41
SUMO3-205ENST00000466861 VPS51Q9UID3 782 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 SLCO3A1Q9UIG8 710 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 RAB23Q9ULC3 237 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 PCDHA13Q9Y5I0 950 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 NUP205Q92621 2012 aa23.87■■□□□ 1.41
SUMO3-205ENST00000466861 ZSCAN5CA6NGD5 496 aaPredicted RBP23.86■■□□□ 1.41
SUMO3-205ENST00000466861 H3BRJ5 948 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 KRT7P08729 469 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 RARAP10276 462 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 HLA-EP13747 358 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 ARL4AP40617 200 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 SLC1A1P43005 524 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 COPAP53621 1224 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 SIM2Q14190 667 aaPredicted RBP23.86■■□□□ 1.41
SUMO3-205ENST00000466861 CA9Q16790 459 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 PARP15Q460N3 678 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 RFX8Q6ZV50 586 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 TMPRSS6Q8IU80 811 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 SH2D3CQ8N5H7 860 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 SPC24Q8NBT2 197 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 OR7D4Q8NG98 312 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 FAM71BQ8TC56 605 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 FRS2Q8WU20 508 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 PRCCQ92733 491 aaPredicted RBP23.86■■□□□ 1.41
SUMO3-205ENST00000466861 RPL10LQ96L21 214 aaKnown RBP23.86■■□□□ 1.41
SUMO3-205ENST00000466861 KCTD15Q96SI1 283 aaPredicted RBP23.86■■□□□ 1.41
SUMO3-205ENST00000466861 ATP13A1Q9HD20 1204 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 GPATCH2LQ9NWQ4 482 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 DNAI1Q9UI46 699 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 SCML1Q9UN30 329 aa23.86■■□□□ 1.41
SUMO3-205ENST00000466861 SOWAHDA6NJG2 315 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 ZMPSTE24O75844 475 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 NDST2P52849 883 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 POLD3Q15054 466 aaPredicted RBP23.85■■□□□ 1.41
SUMO3-205ENST00000466861 SLC36A4Q6YBV0 504 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 CEP68Q76N32 757 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 POLNQ7Z5Q5 900 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 TXLNBQ8N3L3 684 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 LZTR1Q8N653 840 aa23.85■■□□□ 1.41
SUMO3-205ENST00000466861 SIPA1Q96FS4 1042 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms