RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 PGBD3Q8N328 593 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 PHTF2Q8N3S3 785 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 CAMKK1Q8N5S9 505 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ALLCQ8N6M5 410 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ATP11CQ8NB49 1132 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 KDM1BQ8NB78 822 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 DTWD2Q8NBA8 298 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 TXNDC5Q8NBS9 432 aaKnown RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 TSTD1Q8NFU3 115 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 TRIM58Q8NG06 486 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 USP33Q8TEY7 942 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 PEBP4Q96S96 227 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 KCTD15Q96SI1 283 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 FEM1AQ9BSK4 669 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 LRFN3Q9BTN0 628 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 FAM126AQ9BYI3 521 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 LACRTQ9GZZ8 138 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 RAB6CQ9H0N0 254 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 KCNH6Q9H252 994 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 SP110Q9HB58 689 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 PCDH18Q9HCL0 1135 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 LZTFL1Q9NQ48 299 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ANLNQ9NQW6 1124 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 RBM12Q9NTZ6 932 aaKnown RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 BCCIPQ9P287 314 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 THAP10Q9P2Z0 257 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 ERVW-1Q9UQF0 538 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 PPP2R2CQ9Y2T4 447 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 REXO2Q9Y3B8 237 aaKnown RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 MTF2Q9Y483 593 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 SNX10Q9Y5X0 201 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 EML5Q05BV3 1969 aa6.54□□□□□ -1.36
SF3B1-206ENST00000462613 MUC22E2RYF6 1773 aaPredicted RBP6.54□□□□□ -1.36
SF3B1-206ENST00000462613 TRIOO75962 3097 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 EDDM13A0A1B0GTR0 161 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TARSL2A2RTX5 802 aaKnown RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 RCCD1A6NED2 376 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF487B1APH4 448 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 PRRT4C9JH25 899 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 FAM72CH0Y354 149 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 I6L893 689 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 APOL1O14791 398 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TRIM24O15164 1050 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 PI15O43692 258 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 KIF5CO60282 957 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 PALMO75781 387 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF189O75820 626 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 APBB3O95704 486 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ACADMP11310 421 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 MX2P20592 715 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 KDELR1P24390 212 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CTNNA2P26232 953 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 IL1R2P27930 398 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 MZF1P28698 734 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 KIR2DL1P43626 348 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CLCN6P51797 869 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 RWDD2BP57060 319 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TAS2R40P59535 323 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 COPS2P61201 443 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 RAD51Q06609 339 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC15Q0P6D6 951 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 MTAPQ13126 283 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ZNF234Q14588 700 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CRY1Q16526 586 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CA9Q16790 459 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 FUT11Q495W5 492 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TTC31Q49AM3 519 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ANKRD20A8PQ5CZ79 823 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TFDP3Q5H9I0 405 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 FSCBQ5H9T9 825 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 SEL1L2Q5TEA6 688 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TMCO4Q5TGY1 634 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 FAM72AQ5TYM5 149 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 EGFLAMQ63HQ2 1017 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 FAM72DQ6L9T8 149 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CXorf57Q6NSI4 855 aaKnown RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TIGD7Q6NT04 549 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 MAMSTRQ6ZN01 415 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 KIAA0907Q7Z7F0 614 aaPredicted RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ADIPOR2Q86V24 386 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 NLRP14Q86W24 1093 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 FAM72BQ86X60 149 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 RFX6Q8HWS3 928 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 KATNAL2Q8IYT4 538 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 UMODL1-AS1Q8N2C9 162 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ATPAF2Q8N5M1 289 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CCDC33Q8N5R6 958 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 ARFGAP1Q8N6T3 406 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TMEM105Q8N8V8 129 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 IL17RCQ8NAC3 791 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 EXD1Q8NHP7 514 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 WFDC5Q8TCV5 224 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CYB5D2Q8WUJ1 264 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CASKIN2Q8WXE0 1202 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 TTC17Q96AE7 1141 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CSPG4P5Q96PW8 444 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 GABRG3Q99928 467 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 FBRSL1Q9HCM7 1045 aaKnown RBP6.53□□□□□ -1.36
SF3B1-206ENST00000462613 KLHL11Q9NVR0 708 aa6.53□□□□□ -1.36
SF3B1-206ENST00000462613 CWC15Q9P013 229 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms