RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 SCML4Q8N228 414 aa16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 EDEM1Q92611 657 aa16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 SKA1Q96BD8 255 aa16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 NMD3Q96D46 503 aaKnown RBP16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 HDAC11Q96DB2 347 aa16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 TMEM120AQ9BXJ8 343 aa16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 WDCPQ9H6R7 721 aa16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 HEY2Q9UBP5 337 aa16.62■□□□□ 0.25
PIKFYVE-206ENST00000443896 I3L4J1 428 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 THPOP40225 353 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 RASSF2P50749 326 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 CCNG1P51959 295 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 BSPRYQ5W0U4 402 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 CD300LGQ6UXG3 332 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 STKLD1Q8NE28 680 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 E2F7Q96AV8 911 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 PKMYT1Q99640 499 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 SLC17A6Q9P2U8 582 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 BIRC5O15392 142 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 B3GAT3O94766 335 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 AP2A1O95782 977 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 GALNT2Q10471 571 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 BST1Q10588 318 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 MTA1Q13330 715 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 MPP3Q13368 585 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 TMED1Q13445 227 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 DSC3Q14574 896 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 TEX44Q53QW1 395 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 STXBP5Q5T5C0 1151 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 PHF12Q96QT6 1004 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 TKTL2Q9H0I9 626 aa16.61■□□□□ 0.25
PIKFYVE-206ENST00000443896 A0A0U1RQF3 1178 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 MTSS1O43312 755 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 ADAMTS4O75173 837 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 POMCP01189 267 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 ALDOAP04075 364 aaKnown RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 BPGMP07738 259 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 MX2P20592 715 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 CES4AQ5XG92 561 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 METTL23Q86XA0 190 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 RBM12BQ8IXT5 1001 aaKnown RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 XPNPEP3Q9NQH7 507 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 OR12D3Q9UGF7 316 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 M0QZQ0 153 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 SEPT4O43236 478 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 HNRNPCL1O60812 293 aaKnown RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 POLBP06746 335 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 BDNFP23560 247 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 TMPRSS15P98073 1019 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 CHI3L2Q15782 390 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 KYAT3Q6YP21 454 aaKnown RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 NUDCD3Q8IVD9 361 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 CCDC97Q96F63 343 aaPredicted RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 ZNF333Q96JL9 665 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 MAGEB3O15480 346 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 ACADSP16219 412 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 GARSP41250 739 aaKnown RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 BRCC3P46736 316 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 OCRLQ01968 901 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 PAN2Q504Q3 1202 aaKnown RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 SPANXN3Q5MJ09 141 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 KCTD11Q693B1 232 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 TAC4Q86UU9 113 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 OR52K1Q8NGK4 314 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 GBA3Q9H227 469 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 DMAP1Q9NPF5 467 aaPredicted RBP16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 TMLHEQ9NVH6 421 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 DSEQ9UL01 958 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 GABRQQ9UN88 632 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 PSAT1Q9Y617 370 aa16.6■□□□□ 0.25
PIKFYVE-206ENST00000443896 LRIG2O94898 1065 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 CD68P34810 354 aaPredicted RBP16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 SERPINB6P35237 376 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 OLIG2Q13516 323 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 LRRC36Q1X8D7 754 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 ARHGAP39Q9C0H5 1083 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 TRHDEQ9UKU6 1024 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 PHF24Q9UPV7 400 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 SNX10Q9Y5X0 201 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 ERI2A8K979 691 aaKnown RBP16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 ZBTB24O43167 697 aaPredicted RBP16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 SNNO75324 88 aaPredicted RBP16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 TOP3BO95985 862 aaKnown RBP16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 HNRNPCP07910 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 SERPINB3P29508 390 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 FAM136AQ96C01 138 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 CERS2Q96G23 380 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 NMRK2Q9NPI5 230 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 CASS4Q9NQ75 786 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 ATXN10Q9UBB4 475 aa16.59■□□□□ 0.25
PIKFYVE-206ENST00000443896 TPP1O14773 563 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 HAUS5O94927 633 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 ASGR1P07306 291 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 ITGA2BP08514 1039 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 MYL2P10916 166 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 PAX3P23760 479 aa16.58■□□□□ 0.25
PIKFYVE-206ENST00000443896 ZBTB17Q13105 803 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms