RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 UNC5BQ8IZJ1 945 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 ABRAQ8N0Z2 381 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 PCDH20Q8N6Y1 951 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 TDRD5Q8NAT2 981 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 SUN5Q8TC36 379 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 TMC2Q8TDI7 906 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 GLT1D1Q96MS3 346 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 IL12RB2Q99665 862 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 LXNQ9BS40 222 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 C17orf80Q9BSJ5 609 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 TRIT1Q9H3H1 467 aaKnown RBP13.04□□□□□ -0.32
HERC3-203ENST00000407637 FANCEQ9HB96 536 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 HMG20AQ9NP66 347 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 PCDHB12Q9Y5F1 795 aa13.04□□□□□ -0.32
HERC3-203ENST00000407637 LOXHD1Q8IVV2 1947 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SLC15A5A6NIM6 579 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 ADORA2AP29274 412 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 RPS6P62753 249 aaKnown RBP13.03□□□□□ -0.32
HERC3-203ENST00000407637 CLCQ05315 142 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 MERTKQ12866 999 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SLC10A5Q5PT55 438 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 STXBP5Q5T5C0 1151 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 RSBN1LQ6PCB5 846 aaPredicted RBP13.03□□□□□ -0.32
HERC3-203ENST00000407637 NAPRTQ6XQN6 538 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 PLEKHG7Q6ZR37 379 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 CAND1Q86VP6 1230 aaKnown RBP13.03□□□□□ -0.32
HERC3-203ENST00000407637 HEATR4Q86WZ0 1026 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 MPP5Q8N3R9 675 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 TTC39CQ8N584 583 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 EGLN2Q96KS0 407 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 RMND5AQ9H871 391 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 ZNF358Q9NW07 568 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
HERC3-203ENST00000407637 TMEM216Q9P0N5 145 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 PI4KBQ9UBF8 816 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 RABL2AQ9UBK7 228 aaPredicted RBP13.03□□□□□ -0.32
HERC3-203ENST00000407637 PSME2Q9UL46 239 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 IGLV3-22A0A075B6J6 115 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 IGKV6D-41A0A0C4DH26 115 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 CHADO15335 359 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SLC16A4O15374 487 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 NUAK1O60285 661 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 UBL4AP11441 157 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 IL1R2P27930 398 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 EPHX2P34913 555 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SERPINB9P50453 376 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 PRELPP51888 382 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 PRKAA2P54646 552 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 ROR1Q01973 937 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 TRIM25Q14258 630 aaKnown RBP13.03□□□□□ -0.32
HERC3-203ENST00000407637 Q3C1V9 767 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 PPM1JQ5JR12 505 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 DARS2Q6PI48 645 aaKnown RBP13.03□□□□□ -0.32
HERC3-203ENST00000407637 PADI6Q6TGC4 694 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 C4orf22Q6V702 233 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 ENOSF1Q7L5Y1 443 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SLC51AQ86UW1 340 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 EPHX4Q8IUS5 362 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SLC38A6Q8IZM9 456 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 KCTD17Q8N5Z5 321 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SPATA18Q8TC71 538 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 SNX19Q92543 992 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 LPGAT1Q92604 370 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 ATP13A3Q9H7F0 1226 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 EFCAB1Q9HAE3 211 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 ACSS2Q9NR19 701 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 KCND2Q9NZV8 630 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 PTPRFP10586 1907 aa13.03□□□□□ -0.32
HERC3-203ENST00000407637 TOR1BO14657 336 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 NRP1O14786 923 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 GABBR2O75899 941 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 SLC7A1P30825 629 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 OCA2Q04671 838 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 EN1Q05925 392 aaPredicted RBP13.02□□□□□ -0.32
HERC3-203ENST00000407637 SPCS2Q15005 226 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 LRIT3Q3SXY7 679 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 IQSEC1Q6DN90 963 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 TMEM270Q6UE05 265 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 TIFABQ6ZNK6 161 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 SLC22A16Q86VW1 577 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 TNS4Q8IZW8 715 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 ANKFN1Q8N957 763 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 MOCOSQ96EN8 888 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 UHRF1Q96T88 793 aaPredicted RBP13.02□□□□□ -0.32
HERC3-203ENST00000407637 SH2D3AQ9BRG2 576 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 AKIP1Q9NQ31 210 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 THG1LQ9NWX6 298 aaKnown RBP13.02□□□□□ -0.32
HERC3-203ENST00000407637 SUCOQ9UBS9 1254 aaKnown RBP13.02□□□□□ -0.32
HERC3-203ENST00000407637 PCDHGC3Q9UN70 934 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 ZNF652Q9Y2D9 606 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.32
HERC3-203ENST00000407637 SBF2Q86WG5 1849 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 TTC34A8MYJ7 566 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 TNPO2O14787 897 aaKnown RBP13.02□□□□□ -0.33
HERC3-203ENST00000407637 TEX28O15482 410 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 PSMD10O75832 226 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 CPNE6O95741 557 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 MPSTP25325 297 aa13.02□□□□□ -0.33
HERC3-203ENST00000407637 SHROOM1Q2M3G4 852 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms