RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 VCPIP1Q96JH7 1222 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 GLT1D1Q96MS3 346 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 OR52B2Q96RD2 323 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 YME1L1Q96TA2 773 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 DHRS9Q9BPW9 319 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ZBED2Q9BTP6 218 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CLPBQ9H078 707 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PCIF1Q9H4Z3 704 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 FKBP14Q9NWM8 211 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 TXNDC16Q9P2K2 825 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SCAF8Q9UPN6 1271 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 RBBP6Q7Z6E9 1792 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 RGSL1A5PLK6 1076 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 B4GALT4O60513 344 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 AMHP03971 560 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 GLULP15104 373 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 GAP43P17677 238 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PRKAA2P54646 552 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 RAD23AP54725 363 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 COPZ1P61923 177 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SLC36A3Q495N2 470 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 TMC5Q6UXY8 1006 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 C1orf186Q6ZWK4 172 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 UTS2BQ765I0 119 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CMASQ8NFW8 434 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ZC3H15Q8WU90 426 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 TCF12Q99081 682 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PCDHAC1Q9H158 963 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 TRPV6Q9H1D0 765 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 NOL6Q9H6R4 1146 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SATB2Q9UPW6 733 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 ZHX2Q9Y6X8 837 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 SNED1Q8TER0 1413 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CSH1P0DML2 217 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CSH2P0DML3 217 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CDH1P12830 882 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 YBX3P16989 372 aaKnown RBP eCLIP9.74□□□□□ -0.858e-8■■□□□ 13.4
SF3A3-201ENST00000373019 YAP1P46937 504 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 GABRB2P47870 512 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 RACK1P63244 317 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 PPP2R2BQ00005 443 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 RHDQ02161 417 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 MROH9Q5TGP6 573 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 TWF2Q6IBS0 349 aaKnown RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 HERC6Q8IVU3 1022 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 MFSD4AQ8N468 514 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 FAM84BQ96KN1 310 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 WDR41Q9HAD4 459 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 FANCEQ9HB96 536 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 GPRC5CQ9NQ84 441 aa9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CCDC177Q9NQR7 707 aaPredicted RBP9.74□□□□□ -0.85
SF3A3-201ENST00000373019 CYP3A7-CYP3A51PA0A087WV96 503 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 CCRL2O00421 344 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 NRP1O14786 923 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 MTRF1O75570 445 aaKnown RBP9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ALDH1A2O94788 518 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 CFHP08603 1231 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 CYP3A7P24462 503 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 DSG3P32926 999 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 MFAP3P55082 362 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 GALK2Q01415 458 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 CETN1Q12798 172 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 CEP55Q53EZ4 464 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L6PQ6QN14 398 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 MFSD2AQ8NA29 543 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ATL1Q8WXF7 558 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 CNDP1Q96KN2 507 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 STRA6Q9BX79 667 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 RAD21L1Q9H4I0 556 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 HMG20AQ9NP66 347 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 SFMBT1Q9UHJ3 866 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ENPP5Q9UJA9 477 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 GGA1Q9UJY5 639 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 DGKBQ9Y6T7 804 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ARHGEF35A5YM69 484 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 STAM2O75886 525 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ENO3P13929 434 aaPredicted RBP9.73□□□□□ -0.85
SF3A3-201ENST00000373019 PRKCHP24723 683 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 CDKN2BP42772 138 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 HARS2P49590 506 aaKnown RBP9.73□□□□□ -0.85
SF3A3-201ENST00000373019 SLC26A2P50443 739 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 GNG2P59768 71 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 XAF1Q6GPH4 301 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 NEK10Q6ZWH5 1172 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 C10orf107Q8IVU9 208 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 UNC45BQ8IWX7 931 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 COLGALT2Q8IYK4 626 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 BPIFB6Q8NFQ5 453 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ADAM32Q8TC27 787 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 FKBP10Q96AY3 582 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ASB9Q96DX5 294 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ADI1Q9BV57 179 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ARMC1Q9NVT9 282 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 ANGPTL3Q9Y5C1 460 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 FER1L6Q2WGJ9 1857 aa9.73□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L15C9J2P7 530 aa9.72□□□□□ -0.85
SF3A3-201ENST00000373019 USP17L13C9JLJ4 530 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms