RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MBD4O95243 580 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 PDE8BO95263 885 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 SERPINB2P05120 415 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 HSP90AB1P08238 724 aaKnown RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 NPSP0C0P6 89 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3HP0C7X1 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 MYCLP12524 364 aaPredicted RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TGM1P22735 817 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 GRK5P34947 590 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 MPLP40238 635 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 EEFSECP57772 596 aaKnown RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 GPC5P78333 572 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 RAE1P78406 368 aaKnown RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 CCDC15Q0P6D6 951 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 MPP3Q13368 585 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 ATG16L1Q676U5 607 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3GQ6DHY5 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3CQ6IPX1 549 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 ANKRD16Q6P6B7 361 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 MTHFD1LQ6UB35 978 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 KIRREL2Q6UWL6 708 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 Q6YL49 198 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 RSRC2Q7L4I2 434 aaKnown RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TBC1D3Q8IZP1 549 aaPredicted RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 FAM71DQ8N9W8 422 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 FSIP1Q8NA03 581 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 OR52L2PQ8NGH6 319 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 ACTRT2Q8TDY3 377 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 HVCN1Q96D96 273 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 TRMT61AQ96FX7 289 aaKnown RBP6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 COQ10AQ96MF6 247 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 PIGSQ96S52 555 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 GPR63Q9BZJ6 419 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 ARHGAP39Q9C0H5 1083 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 UNC45AQ9H3U1 944 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 CDCP1Q9H5V8 836 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 MMRN2Q9H8L6 949 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 PANK3Q9H999 370 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 USP29Q9HBJ7 922 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 LRIT1Q9P2V4 623 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 NARFQ9UHQ1 456 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 ADAMTS5Q9UNA0 930 aa6.22□□□□□ -1.41
RNU4-39P-201ENST00000362455 VWA3AA6NCI4 1184 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 C1QTNF3-AMACRE9PGA6 284 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 SEPT4O43236 478 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 ESRRBO95718 433 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 CD4P01730 458 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 MBPP02686 304 aaPredicted RBP6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 CYP3A4P08684 503 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 ELFN1P0C7U0 828 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 ATP1A3P13637 1013 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 CXCR5P32302 372 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 ELF1P32519 619 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 GALNSP34059 522 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 AVPR1BP47901 424 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 RCAN1P53805 252 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 FOXL2P58012 376 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 TAS2R50P59544 299 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 TLE3Q04726 772 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 LAIR1Q6GTX8 287 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 PRRT2Q7Z6L0 340 aaPredicted RBP6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 SFTPA1Q8IWL2 248 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 C12orf76Q8N812 135 aaPredicted RBP6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 USP38Q8NB14 1042 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 LINS1Q8NG48 757 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 GLMPQ8WWB7 406 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 CAVIN3Q969G5 261 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 EDC3Q96F86 508 aaKnown RBP6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 RBM17Q96I25 401 aaKnown RBP6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 SNX18Q96RF0 628 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 THAP7Q9BT49 309 aaPredicted RBP6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 HERC2P3Q9BVR0 1158 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 CYP4F11Q9HBI6 524 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 EPN1Q9Y6I3 576 aaPredicted RBP6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 C4AP0C0L4 1744 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 SALL3Q9BXA9 1300 aa6.21□□□□□ -1.42
RNU4-39P-201ENST00000362455 CCDC151A5D8V7 595 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 RNMTO43148 476 aaKnown RBP6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 KLK10O43240 276 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 HNRNPRO43390 633 aaKnown RBP6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 CSF1P09603 554 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 CPA1P15085 419 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 MATN1P21941 496 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 ADRA1BP35368 520 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 KRT9P35527 623 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 JAK3P52333 1124 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 EIF5P55010 431 aaKnown RBP6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 NR1H2P55055 460 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 FOXI1Q12951 378 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 RNASE12Q5GAN4 147 aaKnown RBP6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 TBC1D9BQ66K14 1250 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 WDR93Q6P2C0 686 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 VRK3Q8IV63 474 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 PTGR2Q8N8N7 351 aaPredicted RBP6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 PCYOX1LQ8NBM8 494 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 CLEC4CQ8WTT0 213 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 RRP36Q96EU6 259 aaKnown RBP6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 SENP7Q9BQF6 1050 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 ELOVL1Q9BW60 279 aa6.2□□□□□ -1.42
RNU4-39P-201ENST00000362455 SMC4Q9NTJ3 1288 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms