RNA–Protein interactions for RNA: ENST00000336057.9

HDAC5-202, Transcript of histone deacetylase 5, humanhuman

TSL 1 (best) BASIC

Gene HDAC5, Length 5,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-202ENST00000336057 SERPINH1P50454 418 aaKnown RBP16.01■□□□□ 0.15
HDAC5-202ENST00000336057 FITM2Q8N6M3 262 aa16.01■□□□□ 0.15
HDAC5-202ENST00000336057 TERB1Q8NA31 727 aa16.01■□□□□ 0.15
HDAC5-202ENST00000336057 SEPHS2Q99611 448 aa16.01■□□□□ 0.15
HDAC5-202ENST00000336057 MTG1Q9BT17 334 aaPredicted RBP16.01■□□□□ 0.15
HDAC5-202ENST00000336057 DDX28Q9NUL7 540 aaKnown RBP16.01■□□□□ 0.15
HDAC5-202ENST00000336057 SPASTQ9UBP0 616 aa16.01■□□□□ 0.15
HDAC5-202ENST00000336057 NALCNQ8IZF0 1738 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 GRIN3BO60391 1043 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 ATP6V1C1P21283 382 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 LPCAT2Q7L5N7 544 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 CLNKQ7Z7G1 428 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 XYLT1Q86Y38 959 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 PSMD12O00232 456 aaPredicted RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 FGF10O15520 208 aaPredicted RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 SMNDC1O75940 238 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC5-202ENST00000336057 ANPEPP15144 967 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 SREBF2Q12772 1141 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 BHLHE22Q8NFJ8 381 aaPredicted RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 OSCP1Q8WVF1 389 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 TMEM169Q96HH4 297 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 EXOSC4Q9NPD3 245 aaKnown RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 ABCC13Q9NSE7 274 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 RABGEF1Q9UJ41 708 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 MZF1P28698 734 aaPredicted RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 PACS1Q6VY07 963 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 LRRC52Q8N7C0 313 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 PCSK9Q8NBP7 692 aaKnown RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 VPS33AQ96AX1 596 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 ACOX2Q99424 681 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 BDH2Q9BUT1 245 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 ACE2Q9BYF1 805 aaPredicted RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 RHBDL2Q9NX52 303 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 PAIP2BQ9ULR5 123 aaKnown RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 PRIM2P49643 509 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 CCNG1P51959 295 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 PCBP1Q15365 356 aaKnown RBP eCLIP16■□□□□ 0.156e-6■■■■□ 23.8
HDAC5-202ENST00000336057 ANKS3Q6ZW76 656 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 PCDH20Q8N6Y1 951 aaKnown RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 SNRNP27Q8WVK2 155 aaKnown RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 C18orf25Q96B23 403 aaPredicted RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 SHISA4Q96DD7 197 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 COMMD8Q9NX08 183 aa16■□□□□ 0.15
HDAC5-202ENST00000336057 MRPL42Q9Y6G3 142 aaKnown RBP16■□□□□ 0.15
HDAC5-202ENST00000336057 FOXO6A8MYZ6 492 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 HDAC3O15379 428 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ZMPSTE24O75844 475 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ERCC2P18074 760 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ARF4P18085 180 aaPredicted RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 SOAT1P35610 550 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 GRM5P41594 1212 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 GRIA4P48058 902 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 RUNX1T1Q06455 604 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 FASTKD3Q14CZ7 662 aaKnown RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 CYP1B1Q16678 543 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 HIST2H2ACQ16777 129 aaPredicted RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 HIST2H2AA3Q6FI13 130 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 DHDDSQ86SQ9 333 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 TTC30BQ8N4P2 665 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 TBC1D19Q8N5T2 526 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 FNDC5Q8NAU1 212 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 FAM13CQ8NE31 585 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ARL8BQ9NVJ2 186 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 TUBGCP4Q9UGJ1 667 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 MYRFQ9Y2G1 1151 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 DUOX1Q9NRD9 1551 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 VPS4BO75351 444 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 HLA-DPA1P20036 260 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 RAD23AP54725 363 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 CSTF3Q12996 717 aaKnown RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 RNASEH2BQ5TBB1 312 aaKnown RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 SLC41A1Q8IVJ1 513 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ULK2Q8IYT8 1036 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 PCDHGC3Q9UN70 934 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 CRYL1Q9Y2S2 319 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 COQ4Q9Y3A0 265 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 CLOCKO15516 846 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 SNUPNO95149 360 aaKnown RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 BPGMP07738 259 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 LTA4HP09960 611 aaKnown RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 SLC2A4P14672 509 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ATP5F1P24539 256 aaPredicted RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 YWHAQP27348 245 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 HIRAP54198 1017 aaPredicted RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 MTA1Q13330 715 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 PPIL2Q13356 520 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 FAM98BQ52LJ0 330 aaKnown RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 LCLAT1Q6UWP7 414 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 LENG9Q96B70 501 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ACTR8Q9H981 624 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 IMPAD1Q9NX62 359 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 KANSL3Q9P2N6 904 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 PLLPQ9Y342 182 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 RGSL1A5PLK6 1076 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 HOXA2O43364 376 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 LDLRP01130 860 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ELAVL2Q12926 359 aaKnown RBP15.99■□□□□ 0.15
HDAC5-202ENST00000336057 ADGRD1Q6QNK2 874 aa15.99■□□□□ 0.15
HDAC5-202ENST00000336057 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.99■□□□□ 0.153e-6■■■■□ 20
HDAC5-202ENST00000336057 OR56A4Q8NGH8 313 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms