RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 WDR55Q9H6Y2 383 aaPredicted RBP18.22■□□□□ 0.51
TSPAN17-201ENST00000298564 COPS7BQ9H9Q2 264 aaPredicted RBP18.22■□□□□ 0.51
TSPAN17-201ENST00000298564 TBC1D30Q9Y2I9 924 aa18.22■□□□□ 0.51
TSPAN17-201ENST00000298564 ITGA2BP08514 1039 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 SOX4Q06945 474 aaPredicted RBP18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 SLC9B1Q4ZJI4 515 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 MAPK15Q8TD08 544 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 DCUN1D1Q96GG9 259 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 CSPG4P5Q96PW8 444 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 PHF24Q9UPV7 400 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 F2P00734 622 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 IL1BP01584 269 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 PCLAFQ15004 111 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 CNGA3Q16281 694 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 ANKRD23Q86SG2 305 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 CDKL3Q8IVW4 592 aaPredicted RBP18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 SPNS2Q8IVW8 549 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 ZFP28Q8NHY6 868 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 PNPLA8Q9NP80 782 aa18.21■□□□□ 0.51
TSPAN17-201ENST00000298564 SMIM35A0A1B0GVV1 85 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 CCNT2O60583 730 aaKnown RBP18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 CD4P01730 458 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 GOT1P17174 413 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 CDC42EP1Q00587 391 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 MAP7Q14244 749 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 AAGABQ6PD74 315 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 FAM131BQ86XD5 332 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 FBXW8Q8N3Y1 598 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 ZNF781Q8N8C0 355 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 APPL2Q8NEU8 664 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 GSDMBQ8TAX9 411 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 LENG8Q96PV6 779 aaPredicted RBP18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 PTPN18Q99952 460 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 TREHO43280 583 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 ERVK-10P10266 1014 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 TKTP29401 623 aaKnown RBP18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 FDFT1P37268 417 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 NUDT2P50583 147 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 SNX17Q15036 470 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 MYLK3Q32MK0 819 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 PGM2L1Q6PCE3 622 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 OR52B2Q96RD2 323 aa18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 EBNA1BP2Q99848 306 aaKnown RBP18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 FRMD8Q9BZ67 464 aaPredicted RBP18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 DNAAF2Q9NVR5 837 aaKnown RBP18.2■□□□□ 0.5
TSPAN17-201ENST00000298564 SF3B1O75533 1304 aaKnown RBP eCLIP18.2■□□□□ 0.54e-7■■■■■ 160.1
TSPAN17-201ENST00000298564 MBLAC1A4D2B0 266 aaPredicted RBP18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 MAGEA6P43360 314 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 GALK1P51570 392 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 TMED1Q13445 227 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 CYTH1Q15438 398 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 GRIN3AQ8TCU5 1115 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 FAM149B1Q96BN6 582 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 COG4Q9H9E3 785 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 DTLQ9NZJ0 730 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 DNAJB4Q9UDY4 337 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 GLTPD2A6NH11 291 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 H3BSA7 217 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 DNAJA2O60884 412 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 GCATO75600 419 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 MLH1P40692 756 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 MFSD10Q14728 455 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 DLG2Q15700 870 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 PLD6Q8N2A8 252 aaKnown RBP18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 ZSCAN18Q8TBC5 510 aaPredicted RBP18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 ACTRT2Q8TDY3 377 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 PPP4R1Q8TF05 950 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 CAB39LQ9H9S4 337 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 XPNPEP3Q9NQH7 507 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 TMPRSS4Q9NRS4 437 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 ZNF180Q9UJW8 692 aa18.19■□□□□ 0.5
TSPAN17-201ENST00000298564 SYNJ2BP-COX16A0A087WUM0 186 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 CCDC78A2IDD5 438 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 KLHL2O95198 593 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 SRGAP2BP0DMP2 458 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 COX4I1P13073 169 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 TAF6P49848 677 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 GRM2Q14416 872 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 NCBP2-AS2Q69YL0 99 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 NAPRTQ6XQN6 538 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 SDCCAG8Q86SQ7 713 aaPredicted RBP18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 TRIM74Q86UV6 250 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 TRIM73Q86UV7 250 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 DEFB106AQ8N104 65 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 DGCR14Q96DF8 476 aaKnown RBP18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 PRICKLE1Q96MT3 831 aaPredicted RBP18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 UNKQ9C0B0 810 aaKnown RBP18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 ZDHHC7Q9NXF8 308 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 GDAP2Q9NXN4 497 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 COX16Q9P0S2 106 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 GNEQ9Y223 722 aaKnown RBP18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 ZNF487B1APH4 448 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 CLDN5O00501 218 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 PLIN3O60664 434 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 CRTAMO95727 393 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 ZFXP17010 805 aaPredicted RBP18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 SAT1P21673 171 aa18.18■□□□□ 0.5
TSPAN17-201ENST00000298564 PITX1P78337 314 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms