RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 ERGIC2Q96RQ1 377 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 PDCL3Q9H2J4 239 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 MTG2Q9H4K7 406 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 ST7Q9NRC1 585 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 FAM207AQ9NSI2 230 aaPredicted RBP18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 FBXL12Q9NXK8 326 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 STIM2Q9P246 746 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 PCDHGC3Q9UN70 934 aa18.14■□□□□ 0.49
SHKBP1-203ENST00000594298 A0A1W2PPC4 97 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 SIN3BO75182 1162 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 SRPRAP08240 638 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 ATP1A3P13637 1013 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 CLCN1P35523 988 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 GALCP54803 685 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 POLR2FP61218 127 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 RPS24P62847 133 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 CDH18Q13634 790 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 SMAD1Q15797 465 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 CST6Q15828 149 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 INAVAQ3KP66 663 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 MS4A13Q5J8X5 152 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 C9orf64Q5T6V5 341 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 ADAT2Q7Z6V5 191 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 SPAG5Q96R06 1193 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 ACE2Q9BYF1 805 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 MIS12Q9H081 205 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 NUCKS1Q9H1E3 243 aaKnown RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 GANQ9H2C0 597 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 CBX8Q9HC52 389 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 ADAMTS1Q9UHI8 967 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 AJAP1Q9UKB5 411 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 FZD4Q9ULV1 537 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 SIK3Q9Y2K2 1263 aa18.13■□□□□ 0.49
SHKBP1-203ENST00000594298 TARSL2A2RTX5 802 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 KCNK3O14649 394 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 LUC7L3O95232 432 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 ACAP1Q15027 740 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 FSCBQ5H9T9 825 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 PITRM1Q5JRX3 1037 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 APTXQ7Z2E3 356 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 SLC47A2Q86VL8 602 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 CCDC117Q8IWD4 279 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 CARNMT1Q8N4J0 409 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 GANCQ8TET4 914 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 TRIM62Q9BVG3 475 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 SLC4A5Q9BY07 1137 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 ACP6Q9NPH0 428 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 SCUBE2Q9NQ36 999 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 RTN4Q9NQC3 1192 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 SERGEFQ9UGK8 458 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 ERVW-1Q9UQF0 538 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 NAALADL1Q9UQQ1 740 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 ITIH6Q6UXX5 1313 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 ZFYVE26Q68DK2 2539 aa18.12■□□□□ 0.49
SHKBP1-203ENST00000594298 PLXNB3Q9ULL4 1909 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 A0A1B0GTQ1 180 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 A0A1W2PP55 124 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 LRRC72A6NJI9 287 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 GOLGA8CPA6NN73 597 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 F8VZ95 297 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 MID1O15344 667 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 SERPINC1P01008 464 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 STAT1P42224 750 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 C21orf59P57076 290 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 CAMK2BQ13554 666 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 DCAF6Q58WW2 860 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 NCEH1Q6PIU2 408 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 C19orf48Q6RUI8 117 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 TMEM110Q86TL2 294 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 SCUBE3Q8IX30 993 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 OR2T34Q8NGX1 318 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 SKA1Q96BD8 255 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 SLC6A18Q96N87 628 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 NEUROG2Q9H2A3 272 aa18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 TPX2Q9ULW0 747 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-203ENST00000594298 EDDM13A0A1B0GTR0 161 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 FAM47DPA6NHR8 397 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 MOCS3O95396 460 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 CYP11B1P15538 503 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 KLK7P49862 253 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 CCR5P51681 352 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 ECT2LQ008S8 904 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 COL28A1Q2UY09 1125 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 MMS22LQ6ZRQ5 1243 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 PDZD3Q86UT5 571 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 TAC4Q86UU9 113 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 ZNF677Q86XU0 584 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 MMAAQ8IVH4 418 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 CFAP52Q8N1V2 620 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 FAM149B1Q96BN6 582 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 FAM129BQ96TA1 746 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 ELF4Q99607 663 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 EBF2Q9HAK2 575 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 NLRC4Q9NPP4 1024 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 RAXQ9Y2V3 346 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 PCDHGA1Q9Y5H4 931 aa18.1■□□□□ 0.49
SHKBP1-203ENST00000594298 TRABD2BA6NFA1 517 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 TTC34A8MYJ7 566 aa18.09■□□□□ 0.49
SHKBP1-203ENST00000594298 E9PAM4 449 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms