RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TAPT1Q6NXT6 567 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 SPATA31D4Q6ZUB0 917 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ANKS1BQ7Z6G8 1248 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZNF761Q86XN6 746 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 LGI4Q8N135 537 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ANKRD35Q8N283 1001 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 LINC01356Q8N9X3 169 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 PSD4Q8NDX1 1056 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 MDGA1Q8NFP4 955 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 OR52N2Q8NGI0 321 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 MBD3L2Q8NHZ7 208 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 BPIFB1Q8TDL5 484 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 RFFLQ8WZ73 363 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 HTRA1Q92743 480 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 KCNC2Q96PR1 638 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 TREX2Q9BQ50 279 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 VKORC1Q9BQB6 163 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 FTOQ9C0B1 505 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 TTYH3Q9C0H2 523 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 UNKLQ9H9P5 680 aaKnown RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 ETAA1Q9NY74 926 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 DBF4Q9UBU7 674 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 CDYLQ9Y232 598 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 MYO10Q9HD67 2058 aa5.19□□□□□ -1.58
HMGB1P23-201ENST00000518743 DOCK2Q92608 1830 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 SCN5AQ14524 2016 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 CDK5RAP2Q96SN8 1893 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 A0A087X0M5 115 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 PNMA6EA0A0J9YXQ4 647 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 A0A0U1RQG5 324 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 A0A1B0GX30 115 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 TMEM8BA6NDV4 472 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 LOC730098B7Z3J9 87 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 H0Y3Z8 333 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZSCAN9O15535 394 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 DNPH1O43598 174 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 HTATSF1O43719 755 aaKnown RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 KINO60870 393 aaKnown RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 CSPG5O95196 566 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 CD4P01730 458 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 CD19P15391 556 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 EPHA3P29320 983 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 ICAM3P32942 547 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 NDUFV1P49821 464 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 HHEXQ03014 270 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 SPP2Q13103 211 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 CCNIQ14094 377 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 GRM7Q14831 915 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 N4BP2L1Q5TBK1 243 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 MANEALQ5VSG8 457 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 C19orf48Q6RUI8 117 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 BBS12Q6ZW61 710 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 XYLT1Q86Y38 959 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 RHOT2Q8IXI1 618 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 CCDC105Q8IYK2 499 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 BHLHE22Q8NFJ8 381 aaPredicted RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 POC1BQ8TC44 478 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 PHOSPHO2Q8TCD6 241 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 GOLGA1Q92805 767 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 PPP2R3CQ969Q6 453 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 TEKT1Q969V4 418 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 C3orf49Q96BT1 292 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 C7orf26Q96N11 449 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 LMF1Q96S06 567 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 ANKRD2Q9GZV1 360 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 BRD8Q9H0E9 1235 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 ELAC1Q9H777 363 aaKnown RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 MLXIPQ9HAP2 919 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 PREBQ9HCU5 417 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 G6PC2Q9NQR9 355 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 OLA1Q9NTK5 396 aaKnown RBP5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 TBX20Q9UMR3 447 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 DERAQ9Y315 318 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 TTLL3Q9Y4R7 772 aa5.18□□□□□ -1.58
HMGB1P23-201ENST00000518743 KRTAP9-6A0A140TA67 174 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 B9A039 149 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 PCDH17O14917 1159 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 CD3EAPO15446 510 aaKnown RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 TRIAP1O43715 76 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 SRGAP2O75044 1071 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 ZBED4O75132 1171 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 VPS4BO75351 444 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 TMEM63AO94886 807 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 KCNA2P16389 499 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 SP100P23497 879 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 IGHMBP2P38935 993 aaKnown RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 CLCN5P51795 746 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 AFF3P51826 1226 aaKnown RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 PPP2CBP62714 309 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 PPP2CAP67775 309 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 ADAM17P78536 824 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 CUL4BQ13620 913 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 DCTN1Q14203 1278 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 HLXQ14774 488 aaPredicted RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 CLCA4Q14CN2 919 aa5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 ELAVL1Q15717 326 aaKnown RBP5.17□□□□□ -1.58
HMGB1P23-201ENST00000518743 KCNA10Q16322 511 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms