RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 RAB40AQ8WXH6 277 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 LINC00476Q8WZB0 136 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 ATP2A3Q93084 1043 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 ZNF845Q96IR2 970 aaPredicted RBP8.01□□□□□ -1.13
NUP54-215ENST00000514313 C1QTNF3Q9BXJ4 246 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 EPHX3Q9H6B9 360 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 PRKRIP1Q9H875 184 aaPredicted RBP8.01□□□□□ -1.13
NUP54-215ENST00000514313 TTC12Q9H892 705 aaPredicted RBP8.01□□□□□ -1.13
NUP54-215ENST00000514313 HAUS2Q9NVX0 235 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 SYBUQ9NX95 663 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 KCND2Q9NZV8 630 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 PKP3Q9Y446 797 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 PSAT1Q9Y617 370 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 SPATA31A1Q5TZJ5 1347 aa8.01□□□□□ -1.13
NUP54-215ENST00000514313 CCDC151A5D8V7 595 aa8□□□□□ -1.13
NUP54-215ENST00000514313 C16orf96A6NNT2 1141 aa8□□□□□ -1.13
NUP54-215ENST00000514313 DSCR3O14972 297 aa8□□□□□ -1.13
NUP54-215ENST00000514313 CCNT1O60563 726 aaKnown RBP8□□□□□ -1.13
NUP54-215ENST00000514313 EXOC3O60645 756 aa8□□□□□ -1.13
NUP54-215ENST00000514313 ADH4P08319 380 aa8□□□□□ -1.13
NUP54-215ENST00000514313 ATF7P17544 494 aaPredicted RBP8□□□□□ -1.13
NUP54-215ENST00000514313 CD72P21854 359 aa8□□□□□ -1.13
NUP54-215ENST00000514313 HOXD12P35452 270 aa8□□□□□ -1.13
NUP54-215ENST00000514313 MPLP40238 635 aa8□□□□□ -1.13
NUP54-215ENST00000514313 MLH1P40692 756 aa8□□□□□ -1.13
NUP54-215ENST00000514313 MTNR1AP48039 350 aa8□□□□□ -1.13
NUP54-215ENST00000514313 RPS3AP61247 264 aaKnown RBP8□□□□□ -1.13
NUP54-215ENST00000514313 DMWDQ09019 674 aa8□□□□□ -1.13
NUP54-215ENST00000514313 IL13RA2Q14627 380 aa8□□□□□ -1.13
NUP54-215ENST00000514313 CCNG2Q16589 344 aa8□□□□□ -1.13
NUP54-215ENST00000514313 ERICH6BQ5W0A0 696 aa8□□□□□ -1.13
NUP54-215ENST00000514313 Q6YL49 198 aa8□□□□□ -1.13
NUP54-215ENST00000514313 RTL10Q7L3V2 364 aa8□□□□□ -1.13
NUP54-215ENST00000514313 OR8H2Q8N162 312 aa8□□□□□ -1.13
NUP54-215ENST00000514313 ETNPPLQ8TBG4 499 aa8□□□□□ -1.13
NUP54-215ENST00000514313 ZNF503Q96F45 646 aa8□□□□□ -1.13
NUP54-215ENST00000514313 RANBP17Q9H2T7 1088 aaKnown RBP8□□□□□ -1.13
NUP54-215ENST00000514313 PCDHB16Q9NRJ7 776 aa8□□□□□ -1.13
NUP54-215ENST00000514313 VPS28Q9UK41 221 aa8□□□□□ -1.13
NUP54-215ENST00000514313 SALL3Q9BXA9 1300 aa8□□□□□ -1.13
NUP54-215ENST00000514313 TCERG1O14776 1098 aaKnown RBP7.99□□□□□ -1.13
NUP54-215ENST00000514313 TGFB1I1O43294 461 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 TMCC2O75069 709 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 MT-CO3P00414 261 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 RFPL3SP0C7P2 107 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 LAMP2P13473 410 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 PSMA4P25789 261 aaKnown RBP7.99□□□□□ -1.13
NUP54-215ENST00000514313 HOXD13P35453 343 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 ARL3P36405 182 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 ZNF84P51523 738 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 UFM1P61960 85 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 KCNB1Q14721 858 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 ZNF667Q5HYK9 610 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 GJB7Q6PEY0 223 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 DCDC5Q6ZRR9 648 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 ZNF804AQ7Z570 1209 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 TMEM200AQ86VY9 491 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 ULK2Q8IYT8 1036 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 PLD5Q8N7P1 536 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 EXD3Q8N9H8 876 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 NCSTNQ92542 709 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 CNOT9Q92600 299 aaKnown RBP7.99□□□□□ -1.13
NUP54-215ENST00000514313 ABHD14AQ9BUJ0 271 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 NPLQ9BXD5 320 aaPredicted RBP7.99□□□□□ -1.13
NUP54-215ENST00000514313 GAR1Q9NY12 217 aaKnown RBP7.99□□□□□ -1.13
NUP54-215ENST00000514313 UPB1Q9UBR1 384 aa7.99□□□□□ -1.13
NUP54-215ENST00000514313 TMEM232C9JQI7 657 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 ESRRBO95718 433 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 CYP2D6P10635 497 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 ALOX12P18054 663 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 GSTM2P28161 218 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 ABCD1P33897 745 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 ADRA1BP35368 520 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 SLC9B1Q4ZJI4 515 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 ENOSF1Q7L5Y1 443 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 MDGA2Q7Z553 956 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 TBC1D5Q92609 795 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 HIC2Q96JB3 615 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 COQ10AQ96MF6 247 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 EIF2B3Q9NR50 452 aaKnown RBP7.98□□□□□ -1.13
NUP54-215ENST00000514313 DIAPH3Q9NSV4 1193 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 TFCP2L1Q9NZI6 479 aa7.98□□□□□ -1.13
NUP54-215ENST00000514313 HEMK1Q9Y5R4 338 aaPredicted RBP7.98□□□□□ -1.13
NUP54-215ENST00000514313 SIRT4Q9Y6E7 314 aaPredicted RBP7.98□□□□□ -1.13
NUP54-215ENST00000514313 MCIDASD6RGH6 385 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 AP3D1O14617 1153 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 LDLRAD4O15165 306 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 ORC4O43929 436 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 SGPL1O95470 568 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 HOXB9P17482 250 aaPredicted RBP7.97□□□□□ -1.13
NUP54-215ENST00000514313 TGM2P21980 687 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 TYK2P29597 1187 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 ICAM3P32942 547 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 GJC1P36383 396 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 AVPR1BP47901 424 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 ADPRHP54922 357 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 EFNB1P98172 346 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 FOXI1Q12951 378 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 SLC14A1Q13336 389 aa7.97□□□□□ -1.13
NUP54-215ENST00000514313 FOXE3Q13461 319 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms