RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 DCAF17Q5H9S7 520 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MDH1BQ5I0G3 518 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CCDC183Q5T5S1 534 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SPOPLQ6IQ16 392 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 USP45Q70EL2 814 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GAREM2Q75VX8 874 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PDZD4Q76G19 769 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 BMP8AQ7Z5Y6 402 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 IRF2BP1Q8IU81 584 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DENND1CQ8IV53 801 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FAM114A1Q8IWE2 563 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SUGP1Q8IWZ8 645 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FUKQ8N0W3 1084 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 OR2C3Q8N628 320 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 KIAA1958Q8N8K9 716 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 OR6B3Q8NGW1 331 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 LMO3Q8TAP4 145 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ITFG1Q8TB96 612 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SHKBP1Q8TBC3 707 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 EDAQ92838 391 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TRIM63Q969Q1 353 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 JAKMIP2Q96AA8 810 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TCEAL4Q96EI5 215 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MVB12AQ96EY5 273 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SMARCD1Q96GM5 515 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CNOT6LQ96LI5 555 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FAM81BQ96LP2 452 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 NT5C1BQ96P26 610 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TBCBQ99426 244 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SEPT5Q99719 369 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 HNRNPABQ99729 332 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DPH2Q9BQC3 489 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PI4K2AQ9BTU6 479 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 BOCQ9BWV1 1114 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 B3GNT5Q9BYG0 378 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PRDM14Q9GZV8 571 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MYLK2Q9H1R3 596 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SMOC1Q9H4F8 434 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GSX1Q9H4S2 264 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 KCNK12Q9HB15 430 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CSNK1G1Q9HCP0 422 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ZNF334Q9HCZ1 680 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PNPLA8Q9NP80 782 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SLC2A4RGQ9NR83 387 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CCM2LQ9NUG4 571 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ANO10Q9NW15 660 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 COMMD8Q9NX08 183 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 IL37Q9NZH6 218 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 H2AFY2Q9P0M6 372 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MUTYHQ9UIF7 546 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PADI4Q9UM07 663 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DUSP12Q9UNI6 340 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PTPRDP23468 1912 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ELOA3CA0A087WX78 387 aaPredicted RBP4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FAM92AA1XBS5 289 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DYTNA2CJ06 578 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ELOA3DA6NLF2 546 aaPredicted RBP4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SLC38A8A6NNN8 435 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PRR33A8MZF0 331 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FAM47E-STBD1D6RA91 191 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 F8VP50 259 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 AURKAO14965 403 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MAN1A2O60476 641 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SNX2O60749 519 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 LRRN2O75325 713 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TADA3O75528 432 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SOAT2O75908 522 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 RTN3O95197 1032 aaPredicted RBP4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DLGAP3O95886 979 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 AGR2O95994 175 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 THBDP07204 575 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SRFP11831 508 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MYL4P12829 197 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TNFAIP3P21580 790 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SP100P23497 879 aaPredicted RBP4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FCARP24071 287 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ANXA13P27216 316 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GABRR2P28476 465 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ETV3P41162 512 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 RAP1GAPP47736 663 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PPP3CCP48454 512 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PDE6CP51160 858 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ZNF132P52740 706 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 NDST1P52848 882 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 RAD23BP54727 409 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PCBP4P57723 403 aaKnown RBP4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TRIM14Q14142 442 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ZNF268Q14587 947 aaPredicted RBP4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 LLGL1Q15334 1064 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TEAD2Q15562 447 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TAF12Q16514 161 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 STX1AQ16623 288 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MEA1Q16626 185 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MAN2A1Q16706 1144 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 KLHL40Q2TBA0 621 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PLA2G4EQ3MJ16 856 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ELOA3BQ3SY89 546 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ARHGAP15Q53QZ3 475 aa4.88□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TMEM31Q5JXX7 168 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms