RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 TTC36A6NLP5 189 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 EVPLLA8MZ36 301 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 TMEM114B3SHH9 223 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 CBX4O00257 560 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 SEPT4O43236 478 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 KLRC2P26717 231 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 DEFB115Q30KQ5 88 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 C7orf43Q8WVR3 580 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF558Q96NG5 402 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 TMEM120AQ9BXJ8 343 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 RNPEPQ9H4A4 650 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 FETUBQ9UGM5 382 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 ATP11BQ9Y2G3 1177 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 B4GALT5O43286 388 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 MAP3K6O95382 1288 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 MYL4P12829 197 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 PIGZQ86VD9 579 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 SCUBE1Q8IWY4 988 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 PANX3Q96QZ0 392 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 RMND5AQ9H871 391 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 FAF1Q9UNN5 650 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 CROCCQ5TZA2 2017 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 DDX3YO15523 660 aaKnown RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 CYP1A1P04798 512 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 VHLP40337 213 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 ANXA11P50995 505 aaKnown RBP11.77□□□□□ -0.53
PTCH1-208ENST00000430669 SLC40A1Q9NP59 571 aa11.77□□□□□ -0.53
PTCH1-208ENST00000430669 PSME4Q14997 1843 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 TBC1D4O60343 1298 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF7P17097 686 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 ITGA7Q13683 1181 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 FZD8Q9H461 694 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 AP3M1Q9Y2T2 418 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 TIMM13Q9Y5L4 95 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 RAD51BO15315 384 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 SSTR1P30872 391 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 HIRAP54198 1017 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 CYP1B1Q16678 543 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 NKX2-3Q8TAU0 364 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 FBXL18Q96ME1 805 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 CCDC134Q9H6E4 229 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 POLG2Q9UHN1 485 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 AIM2O14862 343 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 FCGR1AP12314 374 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 PTPN4P29074 926 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 SCNN1AP37088 669 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 FLOT2Q14254 428 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF75CPQ92670 426 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 CERS2Q96G23 380 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 PRKAR2AP13861 404 aaKnown RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 SMAD1Q15797 465 aaKnown RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 PARP15Q460N3 678 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 SZRD1Q7Z422 152 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 DEFB128Q7Z7B8 93 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 DSG4Q86SJ6 1040 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 FAM35AQ86V20 835 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 GFM2Q969S9 779 aaKnown RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 MRPL45Q9BRJ2 306 aaKnown RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 C1QTNF7Q9BXJ2 289 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 TUBGCP4Q9UGJ1 667 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 KPNA5O15131 536 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 RPN2P04844 631 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 MED21Q13503 144 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 OSCP1Q8WVF1 389 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 CKAP2Q8WWK9 683 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 NKD2Q969F2 451 aaPredicted RBP11.76□□□□□ -0.53
PTCH1-208ENST00000430669 ACBD6Q9BR61 282 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 C17orf80Q9BSJ5 609 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 GRIN2DO15399 1336 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 ATG7O95352 703 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 ASMTLO95671 621 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 PTPN9P43378 593 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 AQP5P55064 265 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 DSG1Q02413 1049 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 IRF5Q13568 498 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 GRM3Q14832 879 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 ATP6AP1LQ52LC2 224 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 STARD8Q92502 1023 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 RWDD3Q9Y3V2 267 aa11.76□□□□□ -0.53
PTCH1-208ENST00000430669 SMPD1P17405 629 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 PSMB4P28070 264 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 TTPAP49638 278 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 NUDT2P50583 147 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ZNF446Q9NWS9 450 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 AURKCQ9UQB9 309 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 E7ENQ6 273 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 FKBP6O75344 327 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 N4BP2L1Q5TBK1 243 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ARHGAP17Q68EM7 881 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 ILDR2Q71H61 639 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 TSEN2Q8NCE0 465 aaKnown RBP11.75□□□□□ -0.53
PTCH1-208ENST00000430669 QKIQ96PU8 341 aaKnown RBP eCLIP11.75□□□□□ -0.532e-7■■■■■ 29
PTCH1-208ENST00000430669 TSC22D3Q99576 134 aa11.75□□□□□ -0.53
PTCH1-208ENST00000430669 TCF7L2Q9NQB0 619 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms