RNA–Protein interactions for RNA: ENST00000232165.7

UBE3A-201, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-201ENST00000232165 NAA20P61599 178 aa18.03■□□□□ 0.48
UBE3A-201ENST00000232165 BCL2L1Q07817 233 aa18.03■□□□□ 0.48
UBE3A-201ENST00000232165 COL9A3Q14050 684 aaPredicted RBP18.03■□□□□ 0.48
UBE3A-201ENST00000232165 FTHL17Q9BXU8 183 aa18.03■□□□□ 0.48
UBE3A-201ENST00000232165 UTP6Q9NYH9 597 aaKnown RBP18.03■□□□□ 0.48
UBE3A-201ENST00000232165 AHSPQ9NZD4 102 aa18.03■□□□□ 0.48
UBE3A-201ENST00000232165 TMCC3Q9ULS5 477 aa18.03■□□□□ 0.48
UBE3A-201ENST00000232165 DAB1O75553 588 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 PSMB4P28070 264 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 RRM2P31350 389 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 GPC1P35052 558 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 ARMC12Q5T9G4 340 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 PPTC7Q8NI37 304 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 KCTD14Q9BQ13 255 aaPredicted RBP18.02■□□□□ 0.48
UBE3A-201ENST00000232165 COMMD8Q9NX08 183 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 GGA2Q9UJY4 613 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 ZNF862O60290 1169 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 B4GALT4O60513 344 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 RAG1P15918 1043 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 PALB2Q86YC2 1186 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 TMEM159Q96B96 161 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 PHACTR1Q9C0D0 580 aa18.02■□□□□ 0.48
UBE3A-201ENST00000232165 KRCC1Q9NPI7 259 aaPredicted RBP18.02■□□□□ 0.48
UBE3A-201ENST00000232165 C15orf38-AP3S2A0A0A6YYH1 394 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 GNG14A0A1W2PPG7 69 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 CCNT2O60583 730 aaKnown RBP18.02■□□□□ 0.47
UBE3A-201ENST00000232165 TSPAN3O60637 253 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 BAIAP3O94812 1187 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 KRT8P05787 483 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 SERPINB3P29508 390 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 RAD23AP54725 363 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 POLR2LP62875 67 aaKnown RBP18.02■□□□□ 0.47
UBE3A-201ENST00000232165 PGS1Q32NB8 556 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 TJAP1Q5JTD0 557 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 CES3Q6UWW8 571 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 ARPINQ7Z6K5 226 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 C11orf96Q7Z7L8 435 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 MICU2Q8IYU8 434 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 MID1IP1Q9NPA3 183 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 TMCO1Q9UM00 188 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 NDUFAF1Q9Y375 327 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 FMN2Q9NZ56 1722 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 XYLBO75191 536 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 SLC2A4P14672 509 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 XRCC4Q13426 336 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 FASTKQ14296 549 aaKnown RBP18.02■□□□□ 0.47
UBE3A-201ENST00000232165 ZFP1Q6P2D0 407 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 PTF1AQ7RTS3 328 aa18.02■□□□□ 0.47
UBE3A-201ENST00000232165 REXO2Q9Y3B8 237 aaKnown RBP18.02■□□□□ 0.47
UBE3A-201ENST00000232165 IFRD1O00458 451 aaPredicted RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 SYNCRIPO60506 623 aaKnown RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 WDR47O94967 919 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 KLRC2P26717 231 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 CXCL17Q6UXB2 119 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 CYP4Z1Q86W10 505 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 TERB1Q8NA31 727 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 ZNF398Q8TD17 642 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 MCOLN3Q8TDD5 553 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 PDGFDQ9GZP0 370 aaPredicted RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.01■□□□□ 0.473e-16■■■□□ 18.7
UBE3A-201ENST00000232165 ATXN3LQ9H3M9 355 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 TMEM39AQ9NV64 488 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 THG1LQ9NWX6 298 aaKnown RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 CDC16Q13042 620 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 EEF1DP3Q658K8 133 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 OSCP1Q8WVF1 389 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 SLC25A23Q9BV35 468 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 EXOSC4Q9NPD3 245 aaKnown RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 PIH1D1Q9NWS0 290 aaKnown RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 SMPD4Q9NXE4 827 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 MATKP42679 507 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 MAPK8P45983 427 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 MARCKSL1P49006 195 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 DEFA1P59665 94 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 DEFA3P59666 94 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 PLIN5Q00G26 463 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 PREPLQ4J6C6 727 aaPredicted RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 ZBTB49Q6ZSB9 765 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 CERS2Q96G23 380 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 EFR3BQ9Y2G0 817 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 SF3B1O75533 1304 aaKnown RBP eCLIP18.01■□□□□ 0.476e-7■■■■■ 109.6
UBE3A-201ENST00000232165 KNDC1Q76NI1 1749 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 SNUPNO95149 360 aaKnown RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 EPB42P16452 691 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 NPNTQ6UXI9 565 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 GPR141Q7Z602 305 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 YTHDF3Q7Z739 585 aaKnown RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 TRPM4Q8TD43 1214 aa18.01■□□□□ 0.47
UBE3A-201ENST00000232165 FAM124BQ9H5Z6 455 aaPredicted RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 TNPO3Q9Y5L0 923 aaKnown RBP18.01■□□□□ 0.47
UBE3A-201ENST00000232165 CALCAP01258 141 aa18■□□□□ 0.47
UBE3A-201ENST00000232165 ATP6V1B1P15313 513 aa18■□□□□ 0.47
UBE3A-201ENST00000232165 PBLDP30039 288 aaPredicted RBP18■□□□□ 0.47
UBE3A-201ENST00000232165 RASGEF1CQ8N431 466 aa18■□□□□ 0.47
UBE3A-201ENST00000232165 PHF21AQ96BD5 680 aa18■□□□□ 0.47
UBE3A-201ENST00000232165 MYLK2Q9H1R3 596 aa18■□□□□ 0.47
UBE3A-201ENST00000232165 CNGB3Q9NQW8 809 aa18■□□□□ 0.47
UBE3A-201ENST00000232165 CATSPERZQ9NTU4 200 aa18■□□□□ 0.47
UBE3A-201ENST00000232165 SAE1Q9UBE0 346 aaPredicted RBP18■□□□□ 0.47
UBE3A-201ENST00000232165 CLUHO75153 1309 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms